Pseudochaenichthys georgianus (South Georgia icefish): 117448013
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Entry
117448013 CDS
T09629
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SH3_2
SAM_2
Ank_3
SH3_9
Ank_5
PDZ_6
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
117448013
NCBI-ProteinID:
XP_033940958
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Position
6:25172798..25397547
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AA seq
1967 aa
AA seq
DB search
MPLRPAAGKHEPPSPPRQDQRQQHTHTHSPTFTHPYTHTANGSQGASTDSGSSREEDSGV
PIPAFCPVAERSHSARAPMEEPTGNTVVIRIGIPDLQQTKCMKFNVDAPIWLSKQQILCT
LNQSLKDVLNYGLFQPAYNSKAGKFLDEERQLREYPFPSIAPVPYLEFRYKRRVYTQTHL
DEKQLSKLHTKANLKKFMEYVQLRNIEKVSRFLEKGLDPNFHDSDTGECPLTLAAQLEGC
AELIKVLKSGGVHLDYRTKDGITALHKAVRSKNHTALITLLDLGASPDYKDSRGLTPLYH
SSMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRYGHVQHLEHLLFYGADMSSQNAS
GNTALHVCALYNQDSCARVILFRGANKEIKNYNSQSAFQVAIIAGNFDLAEIIKVHKVSD
VVPFRETPSYTSRRRMTAGPLPSPRSLLRSASDNNLNGDHNHLHGLAPREPRGRQGHSPV
PSLRSLPAFGQQHSSLGESHHGEIPDSSLQSTGSSRSSHSRSPSLHHMHEEDRPVPRRSH
SHGYPHGHSHRGRLSPGSVQRDPSPPHHTPPALTGPRGPKRKLYSAVPGRTFIVVKPYTP
QGEGEIQLNRGERVKVLSIGEGGFWEGTVKGRTGWFPADYVEEVQMRQFDPRLETREDRT
KRLFRHYTVGSYDNFTSYSDYIIEEKNAVLQKKENEGFGFVLRGAKAETPIEEFTPTPAF
PALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVSLIRQGGNRLLMKVVSV
TRKPESEEVVRKKAPPPPKRAPSTTLTLRSKSMTAELEELASARRRRGERLDEMLASQES
ILRSQPSEADYRAATVKQRPTSRRITPAEISSLFERQGMTLHGGLHPGIERGHIPLPKGM
SRTKSFGATEEDRLSALAAEHRFPRSSSMTDSLREHSQPHPIPPPPQIAPPPPPYYLDTG
PPPAFCPPPPPSRTHSQGHEPGGRSSFKPSSLDLPYEAAQRQATHLERQKKARSMIILQD
SSHLPVEPTEIPRPSAATPPERIKRKGRVIDNPYANVGQFSIGLFTPTKPQRKKSPLVKQ
LQVEDAQEKASLALAAAHSRESSPSGRHSHTHGHTHTSRADYYQQQLKAERERLRAQGEM
MFQGKGPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGASLASSDSPSLTQSHSIDER
MLTRELGQLPPPALALSPSPSGTTFIHPLTGKPLDPNSPLALALAARERALTSQSPTGSP
EPRTKQDRAGHGVLFMDPQTKESPHGEGATTTPPFSPKSAKAGGYGVVSSPTSILVPQPT
KPQWVTSQSPVSFRQEMEARVEERKEEKRLEDKKSMLISIMDTSQQKTAGLIMVHTTSNG
QSVGVDPHLEKTPALTSTEPSKSQSPRAKSPSPSASQPQAQPHTQRPASPAQDKSLAQGS
SEEDVDPYTVTLPPAMLSSSDEETREELRHIGVLPPPDEFANGMQAQGTPTLPASSPTTP
TTPTPQTPSSPKTPTVMPTQPQPPQLAPPPSAAAVSGKPSDPLEPPPVGVSGSAADSGVE
EADTRSSSDRERDHHLETTSTISTVSSMSTLSSESGEPADTHTTHTSYAEGLTFVLDKPP
VPPKPRLRSQIGGSKGPVTFRDPLLKQSSDSELLSQQQAAALAAAAAGGAGLPFGGSASV
TGLGPTKPRYLFQRRSKLWGDPVEPRGPGVGLGIGSLGNLGGLGLGLGVDDGAKPSVMGE
LSSRLQQLNKDTRSLGEEPLGASLDPGRKSPVAGARLFSSLGELHTISQRSYGTTFTIRP
GSRYPVTRRSPGSGSPDRGDPFGRYSGFGLPTSPTTPPQTILKSSSLSLPQEPKEVRFVM
RSSSAHSHSRSRSPSPSPSPSHSPGLGSPLLALRPFHQKPLHLWNKYDVGDWLESINLGE
HRAGFQEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALKMLLES
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgtccggcagccggcaaacatgagccacccagccctccacggcaggaccag
cggcagcagcacacacacacacactcacccacattcacacacccttacacacacacagca
aacggcagccagggggccagcactgacagcggcagctcccgggaagaggacagcggcgtt
cccattccagctttctgtcccgttgctgagcggagccacagtgccagagcacccatggag
gagccgacaggcaacacggtggtcatccgcattggaatcccagacctgcaacagacgaaa
tgcatgaaattcaatgtggatgctcctatctggctgtcgaagcagcagatcctgtgtact
ctcaaccagagcctgaaggatgtactcaactatggcctcttccagccggcctacaacagc
aaggctggcaagtttctggatgaagagagacagctaagggaataccccttcccctccatc
gctcctgtaccttacctggagttccgttataaaagacgtgtctacactcagactcacctg
gatgaaaagcagctgtcgaagctccacaccaaggcaaacctgaagaagttcatggagtat
gtgcagctgaggaacattgaaaaggtctcaaggttcctggagaaaggcctggaccccaac
ttccatgattcagatacaggagaatgtcctctaacgctggcagcacagctggagggatgt
gcagagctcatcaaggtgctgaagagtgggggggtgcatctggactacagaacaaaagat
ggcattactgccctacacaaggctgtgcgcagcaagaaccatacagcgcttataacactg
ctagacttgggtgcatcgcctgactataaagacagtagggggttgactccgctctatcac
agctccatggtgggaggagacccctactgctgtgagctgctgctgcacgaccatgcccag
gtcggctgtgtggacgagaacggctggcaggagatacaccaggcatgccgctatggccac
gttcagcacttggagcacctgctgttctacggagccgacatgagctcccagaatgcatct
ggaaacaccgccctccatgtgtgtgctctctacaaccaggacagctgtgcacgagttatc
ctgttccggggggccaataaagagataaagaactacaacagccagagcgcctttcaggtg
gctattatagcaggaaactttgatctggctgaaatcataaaggtccacaaagtatcagat
gttgtgcctttcagggagaccccctcttacaccagccgtcgacgtatgacagcgggaccc
ctgccctcgccacgatctctgctccgctctgcgagtgacaacaacctgaacggggaccac
aatcacctccacggtctggcccccagagaacctcgtggccggcagggtcactcccccgtc
ccctcactgcgcagcctgccagctttcggtcagcagcacagcagcctcggagagagccat
catggagagatccctgacagcagtctccagagcacaggcagctccagatcctcccattcc
cgctcgccttcgctacatcacatgcacgaggaggacaggccggtccccaggagatcccac
agccatggataccctcatggacacagccatcgtggaagactcagccctggctcagtgcag
cgagacccaagccccccacatcacacccccccagcactgacaggcccccgcgggcccaaa
cggaaactctacagcgctgtcccgggacgtaccttcatcgtggtcaagccctacacgcca
cagggggagggagagatccaactcaaccgaggagaaagagtcaaagtgctgagtataggg
gaaggaggattctgggaaggcaccgtcaaagggaggacaggatggtttccagcagactat
gtggaagaagttcagatgaggcagtttgacccgcggctagagactcgggaggaccgcact
aagagactgttcagacactacactgtgggatcctacgacaacttcacctcatacagtgac
tatatcatagaagagaaaaatgctgttttgcagaagaaagaaaacgaggggtttggcttc
gtcctgcggggagccaaagctgagacgcccatcgaggagttcacccccaccccagcgttc
cccgcccttcagtacctggagtctgtggatgtggagggagtggcctggagggctggtctg
aggacaggagacttcctcatcgaggtgaacggggtgaatgtagttaaagtgggccataag
caggtggtgtccctgatccggcaggggggcaaccggctgctgatgaaggtggtgtccgtc
acacgcaagcctgagtctgaggaggtcgtccgcaagaaagctcccccgccacccaagaga
gcccccagcaccaccctgacgctgcgctctaagtccatgaccgctgagctggaagaactg
gcttctgctcggaggagaagaggagagagactagatgagatgttggcatcacaggagtct
atcttgcgttctcagccctcagaggcagattacagagcagctactgtcaaacaaaggcct
accagcaggagaattacaccagcagagatcagttcactgtttgagagacaagggatgact
ctacatggaggtctgcaccccggcattgagagaggtcacataccgctacccaaggggatg
tccaggaccaagtcttttggtgccactgaggaggatcggctgtcggcccttgcagccgaa
cacaggtttccccgcagttcctctatgacagacagcctccgagaacactctcagccccat
cccatccctccacctccacaaattgcacctcctcctcctccctattacctggacactggt
cctcctccagccttttgtccccctcctcccccatctaggacccacagtcagggccatgag
cctggaggacgctccagcttcaagccttcatctttggatctgccgtacgaggccgctcag
cgacaggccacacacttagagagacagaagaaagcgcgctccatgatcatccttcaggac
tcttcacatctacctgtagaaccgacagaaatccctcgtccttctgctgctactccacct
gagcgaatcaaaaggaagggtcgggttattgacaacccttatgccaatgtgggtcaattt
agtattggactgttcacacccaccaagccccagaggaagaaaagtccactggtgaaacag
ctacaggtggaagatgcacaagaaaaagccagtttggccttagctgctgcccactcccga
gaaagctctccctcaggacgacactcacacacccatggacacacacacaccagccgtgca
gactactaccagcagcagctgaaggctgagcgagagcgtctgcgtgcccagggagagatg
atgtttcaggggaagggtcccttcgccgctgctatagctggagcagtgaaagatcgtgag
cgtcgtctagaagaacggagaaaatccactgtcttcctttccgttgggactatggagggg
gcgtccttagccagctctgactccccatctctgactcagtctcactccatcgatgaacgg
atgctcacccgagagctgggacagctgcctccccctgccttggctctgagcccctcacct
agtgggaccacctttatccatccgctcacaggaaaacccctggaccctaactctccactg
gctcttgcgctggccgcaagggagagagcactgacctcccagagcccgacgggcagccct
gagccgaggactaaacaggatcgagcaggccatggcgtgttgttcatggaccctcagacc
aaagagtctccacatggggaaggggctaccacaactccccctttttcacctaaaagcgcc
aaggcaggggggtatggagttgtttcctccccgacatctattttagttccccagcccacc
aaaccacagtgggtcacatcacagtcaccggtgtctttccggcaggagatggaggccaga
gtagaggagaggaaggaggagaagagacttgaggataaaaagagtatgttgatcagtatt
atggacacgtcacagcagaaaacagcagggcttattatggtccatactaccagtaacggc
cagtcagtcggggtagatccacacctagaaaagacacctgccctcacgtccacagagccc
agcaagtctcaaagtccaagggctaaatcccccagcccctctgcctcgcagccccaggcc
cagcctcacactcagcgtcccgccagtccagcgcaggacaagagtctggctcagggcagc
tccgaggaggacgtggacccctacaccgtgaccctgcctcctgcaatgttgtcctccagc
gatgaggaaacaagagaagagcttcgtcacattggagtccttccaccacccgatgagttc
gctaatggcatgcaggcacaggggacgccaactctacctgcctcctctcccaccacccct
acaacaccaacgccccaaactccgtcatccccaaaaactccaactgtgatgcccacccag
cctcagcctccccagctggcacctccacccagtgcagcagctgtctcagggaagccctct
gaccctctggagcccccaccggtgggagtgtccggctctgcggctgactcaggtgtggag
gaggccgacacgcgcagctccagtgacagagagcgagaccaccatctcgagaccaccagc
accatctccacagtttccagcatgtccaccctgtcctcagagagcggcgagcctgcagac
acacacaccacgcacacctcctacgccgaagggctgacttttgtgctcgacaagccgcca
gtgcctcctaagccccgactcaggtcccagataggaggcagtaaaggccccgtcaccttc
agggaccctctgctgaagcagagctccgacagcgagctgctctcacaacaacaggctgct
gccctggctgctgctgctgcaggcggagccgggctgcccttcggcggctcggcctcagtg
acaggactcggccccaccaagccgcgctacctcttccagcggaggtccaagctgtggggg
gacccagtggagcctcgtgggccaggggtggggttaggtattgggagtttgggaaatcta
ggcgggctgggattgggactcggtgtagatgatggagcaaaaccttctgttatgggagag
ctcagttcacgactacagcagctaaataaagacactaggtcactgggagaggagccgctg
ggagcatcacttgacccggggagaaagtcacctgtggcaggtgccagacttttcagcagc
ctaggcgagctccacaccatttctcagagaagttatggcaccaccttcaccatccgccct
ggcagccgttaccctgtcacccgacgcagccccggttcaggctcccctgatcggggtgac
ccattcggacgatactcaggcttcggcctaccgacctcaccgactacacccccacaaacc
atcctcaaatcctccagcctcagcctaccccaggagcctaaagaggtccgctttgtgatg
aggagctccagcgcccattcccattcccgctctcgctctccgtccccgtccccatccccc
tcccattctcccgggctagggtcaccacttttagccctccggccctttcaccagaaaccc
ctccacctctggaataagtatgacgttggagactggctggagagcatcaatctgggggag
cacagagcagggtttcaggaacacgagatcgaaggctctcacctcccagctctgaccaag
gatgactttgcagagctgggagtgacgagagtgggacaccgcatgaacatcgaacgggcg
ctaaagatgctgctggagagctga
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integrated database retrieval system
