Pseudochaenichthys georgianus (South Georgia icefish): 117448186
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Entry
117448186 CDS
T09629
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117448186 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117448186 (exosc6)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117448186 (exosc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117448186
NCBI-ProteinID:
XP_033941251
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All DBs
Position
6:12934828..12936266
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AA seq
274 aa
AA seq
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MPTDTKRVRGPEVSQSPTLFLCKHAAVLPSHGPRADGRQRDQVDVRPVFVRCGLVSQAKG
SAYIEAGNTKLMCCVYGPREMERKDETDMKCGKLTTDMRFAPFSCLERGSWIQGSQDKDL
SLMLHESLQPAVCLHKYPRSQIEVNVMVLENSGSVLAHAVTCASLALADAGIEMYDLVLG
CSIRQNVASYVVDPSYMEENSCSSVSSENQGGLTVAFLPSLNQISGLQSDGEMTEETLTA
GVRTCIEGCYKLYPVIQQALTKAVRRAAPPPSES
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacaccaaacgtgtacgcggcccagaagtttctcaaagtccgactctgttt
ttgtgtaagcatgcggccgttctcccctcgcacgggcccagagcggacggacggcagcgg
gaccaggtagacgtccggccggtgtttgtgcgctgcgggctggtgagccaggctaaaggc
tccgcgtacatcgaggctggaaacaccaagttgatgtgctgcgtttacggccccagagaa
atggagcggaaagatgagaccgatatgaaatgtggaaagttgactactgacatgcgtttc
gctccattttcctgcctggagaggggctcctggattcagggaagccaggacaaggacctc
tccctgatgctacatgagagtctgcagccagctgtgtgcctccataaatatccccgctct
cagattgaggttaatgtgatggttcttgagaacagcggctcagttctggcccatgctgtc
acgtgcgcttccctcgctcttgcagatgcaggaatcgaaatgtatgatctggtgcttggt
tgttccatacgtcagaatgtcgcctcttatgttgtcgatccttcttacatggaggaaaac
agctgcagctcagtcagcagtgagaaccagggtggtctgactgtagctttcctccctagc
ctgaaccagatttctgggctgcaatcagatggagaaatgactgaagagactctgacagct
ggggtccggacctgcatcgagggatgctataaactgtaccctgtcatccaacaagccctg
accaaggctgtgcgccgagctgcccccccaccatcagagagctga
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