Pseudochaenichthys georgianus (South Georgia icefish): 117448200
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Entry
117448200 CDS
T09629
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117448200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117448200
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117448200
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
HECT type E3
117448200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Parvo_NS1
Xre_MbcA_ParS-like_N
Motif
Other DBs
NCBI-GeneID:
117448200
NCBI-ProteinID:
XP_033941271
LinkDB
All DBs
Position
6:complement(9092986..9108310)
Genome browser
AA seq
987 aa
AA seq
DB search
MFSWGEHGCQLGDGFNISTADGVPFLNRVHITELSAGRTVLAFIQGGGEASVIRTEESED
GRRVRGEQKFVKFKDKIKAVSCGDDTVTLLSERGQVLCLDTSLVPRPLAALCNIEVSQVA
CGSQHSVALSKDGQVYTWGQGSGGQLGLGERQLSATSPQHLNSLSAVPLVQVAAGGGQSF
ALSVSGALFSWGSNHCGQLGLGDTTDRHTPTPLHNLNTKKTIHISCGKDHTATLTKDGAV
FTFGSGEHGQLGHNSFRDELRPRLVAELWGAKVTKIACGRHHTLVLTDSKRVYSFGCGEQ
GQLGHGEESPPSVPLPVQMPQDITDGPKIRNIFAGGNCSFATSVQEAQEESNTDSNVKQD
SIDGLIDKWLSKGNSRSWKRKQQNVSRTFSSASRVNQIFMDQSQDKHFRTSPKYHGLNFA
LVQCAFEKLAKRDGLLEKVEEAVLHLLPSLDEEPVGVEGLRIFLILNELLHVIQKYKLQS
STKLSDAVAAAIQSLSAESRRVIGDWWSSLPSSTMSKHVKVWKQALSVILSNQPVPRNSG
VRNLLLVLQLMYNANSRIAGSKRLPEKTFCVGFSENFLQEDVQLWRSMSKIKDTDDQPLI
ICNFPFVMDLKSKKIAFDIDVCAKKEQQTMRAWCYGLTNPYFELKLKRKSLLEGTFGQLA
AAPLSELKKPLMVYFDGDPTITLVSNRDLFHHSFRSMVSNKFEMFMFNTPETLAWFRSTA
TDEDKTNCLLFGVLCGLALYNQCIIHLQFPLALFKKLLGVEPTLEDMMEFSPSVGKSLQY
ILDSEDDEVENLYAEFLINWDQKEVDLDPQNPEKPVTAQNRKEFVDAYVNHAFNTSVEGV
FQEFKRGFFMVCDQDAVKLFRPEELQRVLVGQEVYDWAKLKQNTVWDLRLGYNTIQMFWE
VFEHLTEDQKKDFLWFLTGFRGVPIFGMDEVKMNIQLIQIQSGQTYDQHFPGSLTCHSIL
TLPIYSSKEIMRDRLTEALLTVKGFSE
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagagcacggctgccagctgggagatggttttaacatctcaacagct
gatggagtccccttcctgaacagagtccacatcacggaactgtcagcgggtcgcactgtg
ctcgccttcatccaggggggtggagaggcttccgttatccgcaccgaggagagcgaagat
gggagaagagtcagaggagaacagaagtttgtgaagtttaaagacaagataaaggctgtg
agttgtggagatgatacggtcacactgctgtctgagagaggacaagttctctgtctggac
acaagtctcgttccaaggcctttggcagctttgtgtaacatagaggtttctcaggttgct
tgtgggagccagcattcagtagccttgtcgaaagatggtcaggtgtatacatggggccaa
ggctccgggggccagctgggtctgggggagaggcagctcagcgccacatccccccaacac
ctgaactctctgtcagcggtccccctggtgcaggtcgctgcagggggggggcagagcttc
gccctctctgtctctggagcgctgttcagctggggcagcaaccactgtgggcagctcggc
ctgggagacactacagacagacatacaccaactcctcttcacaacctaaacacaaagaaa
actattcacatctcctgtggaaaggaccacactgctactttaactaaggacggtgcagtg
tttacgtttggctctggtgaacatggacagctcggacacaactcattcagagatgaacta
cgacctcggcttgttgcagagctctggggagcaaaggtcaccaagatcgcctgtggaaga
catcacacattggtgttgacggactccaagagggtctactcctttgggtgtggagagcag
gggcagctgggacacggagaggagagtcctccgtctgtgccgctacctgttcaaatgcca
caggatatcactgatggtcctaaaataagaaacatcttcgcgggaggaaactgttcgttt
gcaacttctgttcaggaagctcaagaggagtcaaacactgacagcaatgtaaaacaggac
tctattgatggcctgattgacaaatggctctctaaaggcaattcaagatcatggaaaagg
aaacaacagaatgtcagcaggacgttttcctctgcatcacgtgtgaatcaaatcttcatg
gaccaaagccaagataaacatttccggacttctcctaagtaccacgggttgaacttcgcg
cttgtgcaatgtgcttttgagaaactggcaaagagggatggtcttttggaaaaggttgag
gaagctgtcttgcacttgcttccttcccttgatgaggagccagtgggagtggaggggctg
aggatcttcctgattctcaatgagctcctgcatgtgatccagaaatacaaactgcagtcg
agcacaaagctctccgacgcggtggctgctgccatacaaagtctttctgctgaaagccgt
cgggtcataggggactggtggtcctcactgccatcctccaccatgagtaaacatgttaag
gtgtggaagcaggccctctcagtgatcctgtccaaccagcctgttcctcgaaactcagga
gtcagaaacctgctcctagtcctccagctgatgtacaacgccaacagcagaatcgcagga
agtaagagactcccagaaaaaacgttctgtgtggggttcagcgaaaactttcttcaagaa
gatgttcagctttggcggtcaatgtcaaaaatcaaggatacggatgatcagccacttatc
atctgcaatttcccatttgtgatggatctgaaatcaaagaaaattgcttttgacatcgat
gtatgcgctaagaaagaacaacagacaatgagggcttggtgttatggattgacaaatccc
tattttgaactgaagctgaagcgaaagtcacttttggaaggcaccttcggacaactggct
gctgcaccgctcagtgagctgaagaagccacttatggtctatttcgatggggacccaacg
atcacacttgtgtccaacagagacctttttcaccactcatttcgtagtatggtgtcaaac
aaattcgagatgttcatgttcaacaccccggaaacactggcctggttccgctccacggca
acagatgaggacaagacaaactgcttgctgtttggggttctgtgtggattggccttgtac
aaccagtgtatcattcacttacaattcccactggctctgttcaagaagctgctgggtgta
gagcccacactggaggatatgatggaattcagcccgagtgttggaaagagtctgcagtac
atcttagactctgaagatgatgaagttgaaaacctgtatgcagagtttttgatcaactgg
gatcagaaagaggttgaccttgatccccaaaatcctgaaaagccagtgacagctcaaaat
aggaaggagtttgtggatgcctacgtgaatcatgccttcaacacatcagtggaaggtgtg
tttcaggagttcaagcggggcttcttcatggtgtgtgaccaggatgcggtgaagctgttc
cggccagaagagctgcagcgagtgctcgtgggccaggaggtctatgactgggcaaaactg
aaacagaacacagtttgggatctacgactaggctacaacaccatacagatgttttgggaa
gtgtttgagcacctgacagaagaccagaagaaagatttcctgtggttcctgactggtttt
aggggtgttcccatttttggcatggacgaggtcaagatgaatattcaactcattcaaatc
cagagcggtcagacctacgatcagcacttccctgggtctctgacctgtcactctattctg
accctgcccatatactcttccaaggagatcatgagagacaggctgacggaggccctgctg
acggtgaaaggattctctgagtga
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