Pseudochaenichthys georgianus (South Georgia icefish): 117448210
Help
Entry
117448210 CDS
T09629
Symbol
rapsn
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse
KO
K24924
receptor-associated protein of the synapse
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
117448210 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
pgeo04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
117448210 (rapsn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
TPR_MalT
SNAP
zf-RING_11
TPR_11
zf-RING_2
TPR_16
zf-RING_5
TPR_10
DUF3856
TPR_19
RPN7
ARM_TT21_4th
PHDvar_NSD
RNPP_C
Prok-RING_4
zf-RING_UBOX
zf-RING_Vps41
zf-rbx1
AKNA
zf-C3H2C3
Cys_rich_CPXG
zf_RING_Vps8
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
117448210
NCBI-ProteinID:
XP_033941284
LinkDB
All DBs
Position
6:30684367..30694035
Genome browser
AA seq
412 aa
AA seq
DB search
MGQDQTKLQIEKGLRLYQSNQTDKALKVWTNVLWKTSDPGGKFRVLGCLITAHSEMGKYK
DMLKYALTQIDTAREMEDPDYLTEGYLNLARSNEKLCDFQKTVSYCKTCLNMQGTTVSLQ
LNGQVCLSMGNAYLGLSVFQKALESYEKALRYAHNNDDKMLECRVCCSLGNIYVHLKDYE
KALFFPCKAAELVNDYGKGWSLKYRAMSQYHMSVAYRKLERLPDAMECCEESMKIALQHG
DRPLQALCLLNFADIHRCRSDGDKAFPRYESAMGIMTEIGNRLGQSQVYLGVAKCWLLQK
ELDKALESLQRAQELADGMGNKLCSLKVHSLSEGIYRTRGQQEELREQVVKFLQCVEELE
LYCGMCGESIGDRDQKLQALPCSHIFHLKCLQTNGTKGCPKCFKSSMKPGFV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgggccaggaccaaaccaagctgcagatagagaagggcctgaggttgtatcagtccaat
cagacggacaaagccctgaaggtctggacaaacgtgctgtggaagacctcagatcctggg
gggaagtttcgggtgttggggtgcctgatcacagcccactcggaaatgggaaaatataaa
gatatgctaaagtacgctctcactcagatcgacaccgccagggaaatggaggacccagac
tacctgacagagggttacctgaacttggcgcgcagcaacgagaagctgtgcgacttccag
aaaacggtgtcctactgtaagacctgcttgaacatgcagggtaccaccgtcagcctgcag
ctcaacggccaggtttgtctcagcatgggcaacgcctacctcggcctcagtgtcttccag
aaagctctggagagctacgagaaggccctgcgctacgctcacaacaacgacgacaagatg
ctggagtgcagagtctgctgcagtctgggaaacatctatgtccatttaaaggactacgag
aaggcgctgttcttcccctgcaaagccgctgagctcgtcaacgactacggcaagggttgg
agcctcaagtatcgagccatgagccagtaccacatgtctgtggcctacaggaaactggag
cgcctgccggacgccatggagtgctgtgaggaatctatgaagattgctctgcagcacggt
gaccgtcctctgcaggctctgtgcttactaaactttgcagacatacaccgctgcaggagt
gacggtgataaagcattccctcgctacgagtctgcaatgggtatcatgactgagattgga
aaccgtctgggccaatcacaggtctacctgggagttgcaaagtgttggcttctgcagaaa
gagttggacaaggctcttgaatctttgcagcgagcccaggaattagcagatgggatggga
aacaagctgtgctcgctgaaggtgcacagcctgagtgaggggatctatcggacccggggg
cagcaggaggagctccgggagcaggtggtgaagttcctgcagtgtgtggaggagctggag
ctctactgcggcatgtgcggagagtccatcggggacagggaccaaaaactgcaggcatta
ccctgttcccacatcttccatctcaagtgtctgcagacgaacgggacgaagggctgtccc
aaatgtttcaagtcctccatgaagcctggatttgtgtga
DBGET
integrated database retrieval system
