Pseudochaenichthys georgianus (South Georgia icefish): 117448220
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Entry
117448220 CDS
T09629
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X3
KO
K27096
liprin-beta
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117448220 (ppfibp2b)
Membrane trafficking [BR:
pgeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117448220 (ppfibp2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SHE3
ERM_helical
Tektin
ATG16
Crescentin
Cnn_1N
ATG14
AAA_13
V-SNARE
CENP-F_leu_zip
ADIP
Rab5-bind
HIP1_clath_bdg
DUF724
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
117448220
NCBI-ProteinID:
XP_033941298
LinkDB
All DBs
Position
6:complement(99676..191086)
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AA seq
706 aa
AA seq
DB search
MLQQELMSRTSLETQKLDLMDEVSFLKLKLVSIEETHTNTDPDPIDTEQNKAEDLLHEVK
QLKREVEGLQGEKGQYERKLRATKADISELQQLLASKDAEIECLQTQLMARGGTADANTE
RDQEYQRLKAGMESLLASNGEKERRIEELTSLLGQYRKMREVMALTQGVSDEDLSGSSAV
RAFTHKAHSDIVRSQMSSLSSSPFVLSSSPYQRGFDSSIHDSLHTSLLSTGDTSFCNGSW
HQRRLLSSSLEELQSGSLQKDPHLELSRYQTLPGKLMMNKREQRARKHGDGEGEEDVSPG
HCLQQEHYGLNQPEQLKECVLSGQSPLSSGVDSGQQSPVLPENRKSQRGIRKLWGKIRHS
QSGSPAQGHDPELGELKRGGFRATAGPRLARSGNPRDLKMPFCKWSKEQVCDWLEEIGLG
QYGVLACHWVTSGDTLLSSTMQDIEKEPAIKNPLHRKKLQLAMKTISSKQPDKSAELDYI
WVTRWLDDIGLPQYKDQFSEGRVDGQMLQFLTVNELLFLKVTSQLHHLSLKSAIHVLHVN
KFNSNCLKRRPSNQNQLAPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLLMLEP
RFNPETLAMLLNIPPEKTLLRRHLTTNFNNLVGAEAHLEKKVYTEAVGNTPLSITAKVKP
KKLGFTNLTHLRRRRPDESKDYVCPIALSLPRSGVPAVNDEVQVQP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaacaggagctgatgagcaggacctctctggagactcagaagctggatctgatg
gacgaggtgtccttcctgaaactgaagctggtcagcatagaggagacacacaccaacaca
gatccagatcccattgacacagagcagaacaaagcagaggatttgcttcacgaggtaaag
cagctgaagagagaagtggagggtttgcagggcgagaagggccagtatgagagaaaactc
agagccacaaaggccgacatatcagagctgcagcaactcttggcctccaaagacgctgag
atcgaatgtctgcagacacaactgatggcaagaggcggcacagctgacgcaaacacagag
agagaccaagaataccagaggctgaaggctgggatggagtctctgttagcttcaaatggt
gaaaaggagcgacgcatagaggagctgaccagtctgcttggccaatacagaaagatgagg
gaagtcatggcactcacacagggggttagtgatgaggatctgagtggcagctcagcagtc
agagccttcacacataaagcacactctgatattgtcaggtcacagatgtcatcgctgtca
tcttctccatttgtgctatcttcttccccctaccagagaggatttgattctagcatccat
gactctctgcacacatcactgctgtccactggggacacaagcttctgtaatgggtcatgg
catcaacgcaggttgctctccagcagtcttgaagagttgcagagtggatcattacagaag
gatcctcacttggagctgagcaggtaccagacgttgccagggaaactgatgatgaataag
agagagcagagagccaggaagcacggcgacggagagggagaagaagatgtgtctcctggc
cactgcctccagcaggagcactacggtctcaatcaaccagaacaacttaaggagtgtgtt
ctgtcaggtcagtcccccctttcctctggagtggactctggacagcaatctcctgtctta
ccagagaacaggaagagtcagagaggcattaggaaactctgggggaagatacgtcacagc
caatcaggcagtcctgcccagggtcacgaccccgagctgggagagctcaagaggggtggt
ttccgagctacagctggaccaagactggcccgttcagggaacccacgagatctgaagatg
cctttttgtaagtggagcaaagagcaggtgtgtgactggctggaggaaattggactcgga
cagtatggcgtcctcgcttgccattgggtcaccagtggtgatactctactgtcttccacc
atgcaagacatagagaaggagccggcgataaagaatccgctccacaggaaaaagctccaa
ttggccatgaagacgatcagcagcaaacagcctgataaatctgcagagctcgattacatc
tgggtcactcgttggcttgatgacatcgggctccctcaatacaaagaccagtttagtgaa
ggaagagttgatgggcagatgctgcagttcctcactgtgaatgaattgttattccttaaa
gtgaccagccagctgcatcacctcagcctcaagagtgccattcacgttcttcacgtcaac
aagttcaattccaactgcctcaaacgcaggcccagcaatcagaaccagttggctccaagt
gaggttgtccagtggtccaaccaccgagtcatggagtggttgagatctgtggacctggca
gagtacgctccgaacctgaggggcagtggcgtgcatggagggctgctaatgttggagcct
cggtttaacccagaaacgctggccatgctgctaaacatcccaccggagaaaacactgctg
aggcgccacctaacaaccaactttaacaacctggtgggagcagaggctcacctcgagaag
aaggtgtacacagaggcagtggggaacaccccactcagcatcacagctaaagtcaagcca
aagaagttgggcttcactaacttgactcatctcaggaggagacggccagatgaatccaaa
gactacgtgtgtccaatagcgttgtccttgcctcggtcaggagtgcctgcagtgaacgat
gaagtgcaggtgcagccctaa
DBGET
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