Pseudochaenichthys georgianus (South Georgia icefish): 117448289
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Entry
117448289 CDS
T09629
Symbol
wdr78
Name
(RefSeq) WD repeat-containing protein 78
KO
K24723
dynein axonemal intermediate chain 4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117448289 (wdr78)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117448289 (wdr78)
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117448289 (wdr78)
Cilium and associated proteins [BR:
pgeo03037
]
Motile cilia and associated proteins
Dynein arm
117448289 (wdr78)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117448289 (wdr78)
BRITE hierarchy
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
117448289
NCBI-ProteinID:
XP_033941400
EnsemblRapid:
ENSPGEG00000012224
LinkDB
All DBs
Position
6:38654567..38663996
Genome browser
AA seq
773 aa
AA seq
DB search
METKKKSSLLPNASSRAMHKSVSGLHPVSQGSRHMLSFTGSHSRRSSIMAGGSSRKHRTL
EKTPEQAPRRVKVLDDHGHDVAPQQVNEAESGDMKAKPDRIILDEIFSSSGSDHFKSTSS
FSVHAFSSIWSSTLPSSQSTSASLTEDCYSKRDIPINPPASSDVPRKGDNVKHVVTEEML
DEEVYVCLSETEIISLLEIPCTFTSEDADDAEAMKEKNTQYAELCRNRMGNDKYVERSMQ
TSNGTTKKIRIQTDKVEMVDEGTMASIWDIYDSFCVQNETQKKEKADNIETAVNTIKGHE
KRSEKSSSSSTVCTGSTVSSALELEMSENSSNTEANSQLILLSETFEKSLLVMERIVLTN
VFQPRLAAYRQLPILEDPDSTVKPGIEEQSDGGEGSSSSPTLERLWAFSCELTRGHNITC
MAWNKDNQDILAVGYGDCDPETQTPGLICCWSLKNPTWPERVFQCKCSVTSLDFSANNPG
QLAVGMLDGTLAIYNVQRRNITCITDSSECHKKHLHPVWQVSWTKQEMALSGEDRVEALV
AVSADGRVTKWLLSSNGLDCIDLMKLKKSQTLKKKAVENKKKPERIISAMTPGFCVDFHP
IDSSIYLAGTSECLIHKCSVSNSQNVLLTYKKHFCPVNHVEWSPFSPDVFLSCSSDWTIQ
LWKQDCSDPVMSFKSTQRTVSTVRWSPNSSTVFAAINGEMVEIWDLNLNIMLPTVVHRAA
AAVTSLLFASGTDCVLVGDTEGEVTVYQLKNLGVGRDKQVESLEDIISFVISK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaaaagaaaagtagtctgttgcctaacgcatcttctcgagcaatgcataaa
tcagtgtcaggacttcatcctgtcagccaaggctcaagacacatgttgagcttcactggt
tcacacagccgaagaagttccatcatggccggtggcagcagcaggaaacacaggaccctg
gagaagacccctgagcaagcccccaggagagtaaaggtgttggacgatcatggccatgac
gtcgctcctcagcaagtgaatgaagctgagtcaggagacatgaaggccaaaccagacaga
atcatcctggacgaaatattttccagctcaggatcggaccactttaaatccacttcaagt
ttcagtgtgcatgctttcagctcaatttggagtagcaccctcccttctagccagtctacc
tcagcgtcactgactgaggattgttattctaaacgggacataccaataaaccctccagct
tcaagcgatgtgcctaggaaaggagacaatgtcaaacacgttgtgaccgaggagatgttg
gatgaggaagtttacgtctgcctctctgagacagaaatcatttcactgctggaaatcccc
tgcacctttacgtcagaggacgctgatgatgcagaagctatgaaagaaaaaaacactcaa
tatgctgagctctgcaggaacagaatgggtaacgataagtatgtggaacgatcgatgcag
acgtccaatggaacaacaaaaaagatacggatccagaccgacaaggttgagatggtggat
gaaggcacgatggcttctatctgggatatctatgactctttctgcgtccaaaatgaaacc
caaaaaaaggaaaaggcagacaatatagaaacagctgtgaacaccatcaaaggccacgag
aagagatcagagaagagcagcagcagcagcacagtctgcacaggcagcacagttagctca
gcgttagaattggaaatgagcgagaacagttcgaacacggaggctaactcacagctgatc
ctgttgtcagagacgtttgaaaaaagcttattagtgatggagaggatcgtcttgacaaac
gtcttccaacccaggctggctgcgtacagacagctgcccatactagaagaccctgacagc
accgtgaagcctgggatagaggaacagagcgacgggggtgaggggagctcttcatctcca
actcttgagcgtctctgggctttcagctgtgaactcaccagaggacacaacatcacctgc
atggcctggaacaaggacaaccaggatattctggcagtgggatacggtgactgtgacccc
gagacccagacgccaggtctgatctgctgctggtccctcaaaaaccccacgtggccggag
cgagtcttccagtgcaagtgttctgtgacgtctctggacttctcagccaataaccccggc
cagctggctgtggggatgttagacggcactttagccatctacaacgtccagaggaggaac
atcacgtgtatcaccgacagcagtgaatgtcacaaaaagcacctgcacccagtgtggcag
gtcagctggaccaaacaggagatggcgctctcaggcgaggaccgggtggaggctctggtt
gctgtgtcggcagatggcagggtcaccaagtggctcctctccagcaatggtctcgactgc
atagacctgatgaagctaaagaagagtcagacgttgaagaagaaagctgtggaaaacaag
aagaagcccgaacgcattatttcagccatgactcctggtttctgcgtggacttccatccc
atagactccagtatctacctggccggcacatcggagtgcctcatccacaagtgctccgtc
tccaacagtcagaacgtcctcctcacttacaaaaaacacttttgccctgtgaaccatgtt
gagtggtctcctttcagtcctgatgtgttcctcagctgctcctctgattggaccatccag
ctgtggaagcaggactgctccgacccggtgatgagcttcaaatccacccagaggaccgtg
tccaccgtcaggtggtccccaaactcctccaccgtatttgcagccattaacggagagatg
gtggagatctgggacttgaatttgaacatcatgctcccaaccgtcgtgcaccgtgctgca
gctgctgtgacgtccctgctgttcgcctcagggacagactgcgtgttggtgggggacact
gagggggaagtgaccgtctaccagctaaagaacctcggtgtgggaagagacaagcaggtg
gaaagtttggaagacatcattagctttgtgatttccaagtag
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integrated database retrieval system
