Pseudochaenichthys georgianus (South Georgia icefish): 117448294
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Entry
117448294 CDS
T09629
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117448294 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117448294 (tubgcp6)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
117448294 (tubgcp6)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
117448294 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
117448294
NCBI-ProteinID:
XP_033941408
LinkDB
All DBs
Position
6:complement(35141444..35174325)
Genome browser
AA seq
1877 aa
AA seq
DB search
MYSSPNNRMKSSSSSSSSSSSSSSSSSITELLGALCDSSLSGVSWKRRALGGVSRDGFRR
ALKKCAYGALLSKLFQDDTKVSASGAQSATANTPAKNKILMISFDLRVAGCREEAERLEE
KLGMLMEGESSGLKEVDAVLELLVHLAGSAPPPPTSFSRDYMRRERPVLRRPPPWSYQSE
ELQRLEARSWGLVCGEEWRNLESLCGNQRLMDAPPGTGLLALRTKLEVEERFERETRMTL
FGALQHTRTSDIDIRLDLPPVPSNIDVTGLALKIPSCLYQSEDEGFQSASNMTPDSQSET
SPVPDVDIWEALRTFEPGRRRCWESVGCPPGKRESLYLTEGGRESFDQLYRLWEGEMRVV
STATPSPLLPLPLDTQAQLVFDLLNVLIGVASITFPLNQSIQFDVRPGVCVSGASPESVS
RLLGELAHYGTHYLRLSRFSLQCADKKGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLT
ISFLFRKVGRQLRYLSELCCVDGPLGAGQTTFPVGVKLMSYLYNEAQNNCSNENYPVLLS
LLKSSCEPYTRFVSDWVYSGVFRDVYGEFMIQVNEEYLGCRDKHFWVQGYTLISKDVEDC
VPVFLRHIGNDVYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEVIERDCAVY
RGRMERIAKHSAISREEQAQRVERARQELINQVRESAVKTLESIRGRQVSQRLAEEAKKR
ERFDELKQHLEQEQEWRNVAVKRQQGDDFSFARELRDREQRLQALEEQLEQRARKELIAQ
YSRLSEEAARREMRAMWRVQRMRLDEARSQFVTRDRQQIQAILEKYPLGQERPPMEVFQA
VPSVQQTAPQPALESPTQDPPEQQPAETQESHAASPPPHPSSATPRTADPALISENIDIN
DFLSKSSNASSEQVDSALQEIGSELPEVCPTAQLVDYDFSAPFSPLEGITGQASVQPRPR
WGPAGQPDMIQNHPSFSHIPIGENISQVQDGVPRASPFGQASKSSFPLGQYTPEEPQTSA
STASIYGHPSQASVQLVDGSGSMTDNKQEEVASMSEQKTETRSLESKVEGNKENAKSVED
YVFDALPTYKPELSGKAETSLSDCGRIVLPDGSAQNKADNISLPNTQVSGEPVFDAVAQQ
PSLNTHGHSSDSHIQIGQLVSEVSAPLPSHNVHGHASDSHMKIGEHASEVEAPLPSHSVH
GHSSDAHIKVGGNVSDFVAAFPSPNVHGHASDDHFIVGENVSDVDAPLPSPNIHGHSSDA
HIKVGENISDFVAPLPVHNIHGHSSDANIKVGEFVSNVTEVTPRSSKHGHASDGILRPGC
VVSGDEATSPSLPGSTFGHSSDSGLVAGCVVSGDEAKRFPIPGSAHGHASDSHIASGCVV
LKTEPLPSLVPGSAYGHSSDSTLGGGCAVLGKELQPSVLPGSTYGHSSDSSLAVGCVVKG
DGILNQQKTEDNEDGKGFTESWAAGFSLSPGEKSEQEYLLALCAQYEVEQYEDCYNLMAS
SPECQLLKQVTRGPWGFPMDPTLCKATDTTAVQLSELVSLPVLIKQAVTTPLTTHVSLVN
KAVVDYFFVELGVERHFEALRHFLLMEDGEFAQSLSDLLFEKMGSGQTPGELLTPFVLNS
ILSKALQYSLHGDTPLAGNFTFALRFLPETFHPHAPDSLNCLELRYKVDWPLNIIITDSC
MNKYNRLFSFVLQLKHMVWSLREVWFHLKRTALVKGAGRSVQFHQLQLYRHEMQHFVKVI
QGYITNQILQVSWMEFTAKLATANDLDAIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSI
FSLILKFRAQLIAQPWGSQQGEAVHPSFIAMQQSYNTFKYYSQFLFKVVTKLVNRGYQPH
LEDFLLRINFNNYYKDS
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagccccaacaaccgcatgaagtccagcagcagcagcagcagcagcagcagc
agcagcagcagcagcagcagcatcactgagctgctgggggccctgtgtgacagcagcctg
tctggggtgtcatggaaacgccgggccctcggtggagtctcacgggacggtttccgccga
gctctgaagaagtgtgcctacggcgccctgctgtccaagctatttcaggatgacaccaaa
gtgtctgcctcaggagcccagagcgccacagccaatacaccggccaaaaacaaaatcctc
atgataagttttgacttgcgggtagcagggtgccgagaggaagcggaaaggttggaagag
aaactggggatgctgatggagggagaatcctctggactgaaggaagtagacgcagtcctt
gagctcttggtacatcttgccgggtctgcacctccacctcctacctctttcagtagagac
tacatgagacgggagaggcccgtgctgcggaggccccccccctggagctaccagagcgag
gagctgcagaggctcgaggcccggtcgtggggtctagtgtgtggagaggaatggaggaat
ttggagagtttgtgtggaaatcagaggttgatggatgctcctccaggcacaggactgctg
gctctgagaactaaattagaagtggaagaaagatttgagagggagaccaggatgacactg
tttggagcgctgcagcacactcgcacctcagacattgacataagactagacctccctcct
gttcccagtaatattgatgttactggactggctttaaagatcccctcatgtttatatcag
tctgaggatgagggcttccagtcagcttccaacatgaccccagactctcagtcagagacc
agccccgttccagatgttgatatatgggaggctctccgcacgttcgagcctgggagacgc
cgctgctgggagtctgttggctgcccaccggggaaaagagagtccctttatctgacagag
ggaggcagggagtcctttgaccagctctatcgtctgtgggagggggagatgagggtggtc
agcacggcgaccccctctcctctcctccctctgcccctggacactcaggcccagctggtg
ttcgacctcctcaacgtcttgatcggagtggcctccattaccttccctctcaaccagagt
attcagtttgacgtcagaccgggtgtgtgtgtgtccggagcatctccagagagtgtgtct
cgtctcttgggagagctggcccactacggcacccactacctgaggctaagtcgcttttct
ctgcagtgtgctgacaaaaaaggccttgtctttcaggcttttacaggtggtctgcggaag
tatctgcattactacagggcttgtgttctcagcactccccccacccttagcctgttgact
attagcttcctgttccgcaaggtgggccgccaactaaggtatttgtcagagctgtgctgt
gtggacggacctttaggtgcaggccagactaccttccccgtgggggttaaactgatgtcc
tacctgtacaacgaggcacaaaataactgcagcaacgagaactacccggtgctgctgtcg
ctgctgaagagcagctgtgagccgtacacacggtttgtgtctgactgggtgtatagcggc
gtgttccgtgatgtttatggagaattcatgatacaagtcaatgaggaatatctgggctgc
agagacaaacacttctgggtccaaggctacactctgatctccaaggatgtggaggattgt
gtgcccgtcttcctgagacacatcggcaatgatgtgtacgtctgcggaaagacaatcaac
ctcctcaagatctgctgcccacagcactacatctgctggtcggagcttccggtgcctcgc
atcgccgtcaccttctccctccaggaggtggaggtgatcgagagggactgtgctgtgtac
cgagggcgcatggagaggattgctaagcacagcgccatcagcagggaggagcaggctcag
agagtggagcgggcgcgccaggagctgatcaatcaggtcagagagtcggcagtcaaaacc
ctggagagcatccgcgggcgccaggtgtcacaacgtctggctgaggaagccaagaagaga
gagcgttttgatgagctgaagcagcacctggagcaggagcaagagtggcgaaatgttgct
gtgaagaggcagcagggggacgacttcagctttgccagagagctgagggacagagagcag
agactacaggccctggaggagcaactggagcagagagccaggaaagagctgatagctcag
tacagccgtctgtcagaggaggcagctcgcagagagatgcgggccatgtggcgggtgcag
cgaatgagactcgatgaagcccgatctcagtttgtcacacgtgacaggcagcagattcag
gcaattctcgagaaatatcctttaggccaggagagacctcccatggaagtgtttcaagct
gttccctcagtgcaacagactgcaccacaaccagcactggaatctcccactcaggacccg
cctgagcagcagccagcggagactcaagaatctcatgctgcctcaccaccacctcaccca
tcctcagccaccccccgcacagcagaccctgcccttatctctgaaaatatcgacatcaat
gacttcctctccaagtcatcgaatgcctccagcgagcaggtggactccgccttacaggag
attggctctgagctacctgaagtgtgtcctacagcacagctagtagactatgacttcagt
gccccctttagtccactggagggtatcactggccaagcctcagtccagccccggcctcgc
tggggacctgcaggccagcctgacatgatccaaaaccatccctctttttctcacatccca
ataggagagaacatttctcaagtccaggatggcgtccccagagccagcccctttggccaa
gcctccaaatccagctttcctctgggccaatacaccccagaagagccccaaacatctgca
tctacagcaagcatttatggacatccctctcaagcctcagtgcagcttgtggatgggagt
ggctctatgactgacaacaagcaggaggaagttgcgtctatgtcagaacagaagactgaa
acaaggagtttagaaagtaaagtagagggaaataaagaaaacgctaaatctgtcgaggat
tatgtgtttgatgctttgccgacctacaaaccagagctaagtggcaaagcagagacaagt
ctttctgattgtggtaggattgttctacctgatggaagcgctcaaaataaagctgataat
atttcattgccaaacactcaggtctctggagagccagttttcgacgcggttgcccagcag
ccttcacttaacacccacggccactcctctgattcccacatacagatcggacagcttgta
tcagaggtatctgctcctcttccatcccataatgtccacgggcatgcatcagattcacat
atgaagattggagaacatgcttcagaagttgaagcccctctaccttcccacagtgtccac
ggtcactcttctgatgcacacattaaagtcgggggaaatgtttcagactttgtcgctgct
tttccttctccaaatgtccacggtcatgcgtcagatgaccactttatagtcggcgaaaat
gtctcagatgtagacgcccctctgccctcccccaacattcatggtcacagttcagatgcc
cacattaaagtcggagaaaacatctcagattttgtcgcaccacttcctgttcacaacatc
cacggtcactcctcggatgctaatataaaagtgggtgagtttgtgtcgaacgtgaccgaa
gtaacacctcgttcgagtaaacatgggcatgcatcagatggtatacttcgaccaggctgt
gtggtatctggagatgaagccacctctccttcactacctggaagcacttttggtcactcc
tcggactcagggttggtggctggatgtgtagtttcaggagacgaggccaagcgtttccct
atacccggcagtgcccatggtcacgcttcagattcacatatagccagtggatgtgttgtg
ttgaaaactgaaccacttccatcactggtacccggcagcgcctacggccactcctcggat
tcgacgctgggggggggttgcgcggtcttaggaaaagagctgcaaccctctgtactacca
ggcagcacttatggccactcatcagactcttcacttgcggttgggtgtgtggtgaagggt
gatggcatcctgaatcagcagaagacagaagacaatgaagacggtaaagggttcacagag
tcctgggcagccggctttagtttgtctccgggagaaaagtctgagcaggaatacctcttg
gctttgtgtgctcagtacgaggtggaacaatacgaagactgctacaacctgatggcttcg
tcccctgagtgtcagctgttgaagcaggtgactcgcggcccctggggtttccctatggac
cccacgctctgcaaagccacagacaccaccgccgtccagctcagcgagttggtttcactg
ccagttctgatcaaacaggccgtcaccacgccgctcaccacacatgtctctctggtgaac
aaggcagtggtggactacttctttgtggagttaggggtggagagacactttgaggcgctg
cgccatttcctgctgatggaggatggcgagttcgcacagtccctcagcgatctgctcttt
gaaaagatgggcagtgggcagacccccggggagctgctgacccccttcgtcctgaactcc
atcctcagtaaggccctgcagtacagcttacacggagacacaccgttagcgggtaacttc
accttcgccctgcgcttcctcccagagaccttccacccgcacgcccccgactccctcaac
tgtctggagctgcgctacaaggtggactggcctttgaacatcatcatcacggacagctgc
atgaacaagtacaaccgtctgttctcgttcgtgctgcagctcaaacacatggtgtggagc
ctccgcgaggtctggttccacctcaagaggacagctctggtgaaaggtgcgggccgctcg
gtgcagtttcatcagctgcagctctacagacatgagatgcagcattttgttaaagtgata
cagggatacatcaccaaccagatcctccaagtgtcctggatggagttcactgccaaactg
gccactgccaacgacctggacgccatccaccgcacgcacgcagactacctcaacagagcc
atcttcaggggtctgctgacggagaaggcggcccccgtcatgaacatcatccacagcatc
ttcagcctcatcctgaagttccgggcgcagctgatcgcacagccctggggcagccagcag
ggggaggcggtgcaccccagcttcatcgccatgcagcagtcctacaacaccttcaagtac
tactcacagttcctcttcaaagtggtgaccaagctggtgaaccggggctaccagcctcat
ctggaggacttcctgctgcgcatcaacttcaacaactactacaaagactcctga
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