Pseudochaenichthys georgianus (South Georgia icefish): 117448430
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Entry
117448430 CDS
T09629
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03020
RNA polymerase
pgeo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117448430 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117448430 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgeo03021
]
117448430 (polr3b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117448430 (polr3b)
Transcription machinery [BR:
pgeo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117448430 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
117448430
NCBI-ProteinID:
XP_033941626
LinkDB
All DBs
Position
6:23665674..23687235
Genome browser
AA seq
1132 aa
AA seq
DB search
MEVLGGEFGDMTPQELAAPVDTIEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPLEVSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFGPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHQKLVSTFRLMRRAGFINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKR
GQPMVKNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQIALYEHMINKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVK
TRTIELIDFEKLPAGQNATIAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAVTRKPIWRHNILDADGICSPGEKVENKQVLVNKSMPTVTQAPLE
GSTQPGQPLYRDVPVSYKGSTDSYVEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDVIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLVRHGYNYQGKDFVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcttgggggggagtttggtgacatgactcctcaggagctggcggctcctgtc
gacacaatagaggaaaaatggaaactgttaccagcctttctaaaggtgaaaggacttgtg
aagcagcacatcgactcattcaactatttcatcaatgtggagataaagaaaattatgaaa
gcaaacgagaagatcacaagtgatgctgatcccatgtggtacctcaaatacctcaatatc
tatgttggcatgcctgatgttgaagaaagcttcaacgttaccagaccagtatctcctcat
gagtgtcgcctcagagacatgacctactctgcgcccatcacagtggacatcgagtacacg
cgtggcagtcagaggatcatccgcaacgcactgcccatcggaaggatgccgatcatgctg
cgaagctcaaactgtgttctcacaggaaagacacccttggaggtttctaaactcaatgaa
tgtcctctggatccagggggttacttcatagtaaagggtcaagagaaagtcattctgatc
caagagcagctgtccaagaatcgaatcattgtggagcaggacaggaagggagcagtcgga
gcctcagtgaccagctccactcatgagaagaaaagcagaactaatatgattgtcaagcaa
ggcagattctacctgaaacacaacacgctgtcggaggatgccccgatcgccattatattc
aagggcatgggcgtggagagtgaccaggaaatcgtgcagatgatcgggacggaggagcac
gtcatggcgagcttcggcccgagcctggaggagtgtcagaaggcccagatcttcactcag
acgcaggctctgcggtatctggggaataaagtgcggaggcagcgcatgtggggaggaccg
aagaagaccaagatggaggaggcccgagagctcctggcgtctctaatcctcacacatgtg
cctgtcaaagagtttaacttccgggctaagtgtatctacctggctgtgatggtgcggagg
gtgatcctggctcaagggggcaacaaggtggacgacagagattactatggcaacaaacgt
ctcgagttggctggacagctgctgtctctgctgtttgaggatctgtttaagaagttcaac
tctgaactgaagaaaatcgccgaccagatcatccccaagcagagagccgctcagttcgac
gtggtgaagcacatgcggcaggaccagatcacaaacggcatggtcaatgccatatccacg
ggcaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggtgctgtcc
cgtctctcctttatttcagctcttggcatgatgaccaggatctcctcccagtttgagaag
accaggaaggtcagcgggccgcggtccctgcagccgtctcagtggggcatgctgtgtccg
tctgacactcctgagggagaggcctgtggtctggtgaagaacttggctctgatgacccac
atcaccacggacatggaggacggtccgatcatcaaactggccttcaatctgggcgtagaa
gacgtcaacctgctgtgtggagaggagctctcctaccccagcgtcttcctggtcttcctc
aacggtaacattctcggagtgattcgggatcatcagaagctggtcagcaccttcagactg
atgcgccgggcgggtttcatcaacgagtttgtatcaatctccaccaacctgaccgaccgc
tgcgtctacatctcctctgacggaggacgtctctgcaggccttacatcatagtgaagagg
ggacagccgatggtgaaaaacaaacacattgaagatctgtcacagggctacagaaccttt
gaagacttcctgcacgagggcctggtggagtacctggatgtaaatgaggagaatgactgt
cagatcgccctttatgaacacatgattaacaaagacacaacacacttggagatcgagccc
ttcacgctgctcggggtgtgtgctggcctcattccctacccccaccacaaccagtctccc
aggaacacataccagtgcgctatgggcaagcaggccatgggtactattggctacaaccag
aggaaccgtatcgacaccctgatgtacctgctggcctaccctcagaagcccatggtcaaa
acaagaaccatcgagctgattgactttgagaagctgccggccggtcagaacgccaccatt
gctgtgatgagctacagcggctacgacattgaggacgctctgatcctcaacaaagcctcc
cttgatagaggatttggccgttgcctggtctataaaaacgccaaatgcacgctgcgacgt
tacaccaaccagaccttcgacaaggtgatggggcccatgctggatgccgtcacacgaaag
cccatctggaggcacaacatcctggatgctgacggcatctgctctcctggtgagaaagtg
gagaacaagcaggtgttggtgaacaagtccatgccaaccgtcacccaggcaccactggag
ggcagtacccagccaggccagccgctgtacagagacgtgccggtcagctataagggctcc
acagactcgtacgtcgagaaggtcatgatctcatccaacgctgaagatgctttcctcatc
aagatcctcctcaggcagaccaggaggccagagataggagacaaattcagcagtcgacat
ggacagaaaggtgtttgtggcctcatcgtccctcaggaggacatgccgttctgtgacacg
ggcatctgtccagatgtcatcatgaaccctcacggatatccctccagaatgacggtgggg
aagttgatcgagctgctggccgggaaggcgggggtcctggacggacgcttccactacggc
acggcgttcggaggcagcaaggtgaaggacgtgtgtgaggatctcgtccgccacgggtac
aactaccagggcaaagactttgtcacctcaggaatcactggggaacctctggaagcgtat
atctacttcggaccggtgtactatcagaaactgaagcacatggtgctcgacaaaatgcac
gccagagcccgaggccccagagccgtcctcaccaggcagcctacagagggtcgctccaga
gacggagggctgcgtctgggcgagatggagcgcgactgtctgatcggctacggagcgagc
atgctgctgctggagcgcctcatgatctccagtgacgccttcgaggtggacgtgtgcggg
cagtgcggcctgctgggatactcagggtggtgtcactactgtaagtcctcctgccacgtc
tcctctctgcggatcccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatcccccgactcaaactggcacgctacaacgagtga
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