Pseudochaenichthys georgianus (South Georgia icefish): 117448551
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Entry
117448551 CDS
T09629
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X2
KO
K09447
interferon regulatory factor 7
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04620
Toll-like receptor signaling pathway
pgeo04621
NOD-like receptor signaling pathway
pgeo04622
RIG-I-like receptor signaling pathway
pgeo04623
Cytosolic DNA-sensing pathway
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117448551 (irf7)
04621 NOD-like receptor signaling pathway
117448551 (irf7)
04622 RIG-I-like receptor signaling pathway
117448551 (irf7)
04623 Cytosolic DNA-sensing pathway
117448551 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117448551 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117448551 (irf7)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117448551 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
117448551
NCBI-ProteinID:
XP_033941757
LinkDB
All DBs
Position
6:complement(20364824..20368742)
Genome browser
AA seq
436 aa
AA seq
DB search
MQSPTKPPFSSWLIEQVGAGQYPGLCYVGRNKFRVPWKHNSRRDCNDEDSKIFRAWSEAS
GKIHEFPNNKARWKTNFRCALNNLSKGFELIRDNSKNKEDPHKIYEIINTDSGNLESQPV
QDSQEDADMSPDIYNSPTEDQPSGNELILLNNFMTLDLGSQPSDVQLWAKDYVQQNPAVP
ESYPVAAESHPQHIAEQPAYLNPPQVLSLPPQPTIYDLEISIHYRKREMLKTTFSTGLLQ
LHYHHEDPEFNAHRLCFPSTDGLLDQKQVEYTNRILNSIQRGLFLEVRDTGIYAWRQDKC
HVFASTSDPSVAHPNPSKLPPNTIVTLLSFEKYVHELKQFKENNGGSPEYAINMCFGEKF
PDGKPLEKKLIVVKVVPLICRHFHEMAQMEGASSLHSSNVSLQISHNSLFDLINNVFSLP
TAEEPARAAAPFQTQI
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctaccaagcctccgttttccagctggctcatagagcaggttggggcgggc
cagtacccgggcctgtgctatgtgggcagaaacaagttcagagtcccctggaagcacaac
tccagaagggactgcaatgatgaagacagtaaaatattccgggcatggtcagaagcaagt
ggaaaaatccacgagttcccaaacaacaaggccagatggaaaaccaacttccgatgcgct
ctcaacaacctctctaaaggcttcgagttgataagggataattccaagaataaggaagac
cctcataaaatctatgagatcatcaacactgactcaggcaaccttgaaagtcagccagta
caagactcccaggaggatgctgacatgagtccagatatctacaactctcccacagaggac
caaccttcaggaaatgagctcattcttctgaacaatttcatgaccttggatcttggcagc
cagccatcagatgtgcaactatgggcaaaagactatgttcagcagaatccagctgtccct
gaaagctatcctgtagcagccgagagccatccacagcatatagcagagcagcctgcttac
ttaaatcctccgcaagtcctcagtttacctccgcagccgactatatatgacctggagatc
tccatccactacaggaaaagagaaatgctaaagactacatttagcactggacttctccag
cttcattaccaccacgaggaccctgagttcaacgcacatcgtctctgcttcccctccact
gatggtctgctcgaccaaaagcaggttgagtacactaaccgcatcctgaacagcatccag
agaggtctcttcctggaggtacgggacaccggtatctacgcctggaggcaggacaagtgc
catgtgtttgccagcaccagtgatcccagtgtggctcaccctaaccccagcaagctgccc
ccaaacaccattgtgacgctcctgagctttgagaagtacgtgcatgaactgaagcagttt
aaagaaaacaatggtggctctcctgaatacgccatcaacatgtgctttggagagaagttc
cctgatgggaaacctttggaaaagaagcttatcgttgtcaaggtggtccctttgatctgt
cgacactttcatgagatggctcaaatggagggggcttcgtctcttcacagcagcaatgtc
agcctgcagatctcacacaatagcctctttgatcttattaacaacgtctttagtctaccc
acagctgaagagccagcgagggctgctgcacctttccaaactcaaatatga
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