Pseudochaenichthys georgianus (South Georgia icefish): 117448570
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Entry
117448570 CDS
T09629
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04115
p53 signaling pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04137
Mitophagy - animal
pgeo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117448570 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117448570 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117448570 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
117448570 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117448570 (siah1)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117448570 (siah1)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117448570 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
117448570
NCBI-ProteinID:
XP_033941777
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All DBs
Position
6:12605237..12663318
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AA seq
415 aa
AA seq
DB search
MLPKRWTRRKKCDPLCCGVFWDATATVLFPWKRPEKYGVEGLRERSTPMSLVQVKSKPAS
VALQAPPWNSLFRLFSCVATRSVHRTKEVPKFQEKTTALFGNLMDEADSISFDVDVSEVN
SQGLRGQNSQMCKMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDY
VLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEV
TLPHTDKTEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLA
TDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLEL
NGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctaaacgttggactagaaggaagaaatgtgatcctctgtgttgtggtgtgttt
tgggatgctacggcaacagtgctgtttccatggaaaaggccagagaaatatggagtcgag
gggctgcgtgagcgctctacccctatgtctctggtccaagtgaaatcaaagccagctagc
gtagccctgcaagctccgccctggaattccttgttcagactcttctcatgtgtagccaca
aggagcgtgcacaggactaaagaggtccccaaatttcaagagaagacgaccgccttattt
ggaaatcttatggacgaagccgattccatcagttttgatgtagatgtgtctgaggtaaac
agccagggacttagaggtcagaactcacagatgtgcaaaatgagtcgccagactgccacc
gcgctgcccactggaacctccaagtgccccccctcccagcgcgtccccaccctgtcaggc
accacggcctccaacagcgacctggccagcctgttcgagtgccccgtctgcttcgactat
gtgctcccccccatcctgcagtgccagtccggacacctggtatgctcgaactgccggccc
aagctcacctgctgccccacctgccgggggcccctgggctccatcaggaacctggccatg
gagaaggtggccaactcggtcctcttcccctgcaagtacgcctcgtcgggctgcgaggtc
accctgccccacacggacaagacggagcacgaagagctctgcgagttccggccgtactcc
tgcccctgccccggggcctcctgcaagtggcagggctccctggacgccgtcatgccccac
ctgatgcaccagcacaagtccatcaccacgctgcagggggaggacatagtgttcctggcc
acagacatcaacctgccgggcgccgtggactgggtgatgatgcagtcctgcttcggcttc
cacttcatgctggtgctggagaagcaggagaagtatgacggccaccagcagttcttcgcc
atcgtgcagctcatcgggacgcgcaagcaggcggagaacttcgcctaccggctggagctc
aacgggcaccggcgccgcctcacctgggaggccacgccgcgctccatccacgagggcatc
gccacggccatcatgaacagcgactgcctagtgttcgacacatccatcgcacagctgttc
gcagagaacggcaacctggggatcaacgtcaccatctccatgtgctaa
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