Pseudochaenichthys georgianus (South Georgia icefish): 117448881
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Entry
117448881 CDS
T09629
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04081
Hormone signaling
pgeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117448881 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
117448881 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
117448881
NCBI-ProteinID:
XP_033942073
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Position
1:complement(37899667..37916617)
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AA seq
470 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
VSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFPFGAKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHTMLPRFRNPLQQNEPHMPQNATFPESFTQV
NTMPAPFPTSPVNSYPSSPGSGSSSATFPHSPSSTDPGSPFQMPDTPPPAYMPPEEQMTQ
DIPQPMDTTLLAPTLPIESNNRPDVQPVAYEEPKHWCSIVYYELNNRVGEAFQASSTSVL
VDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFV
QSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRMS
FVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcacctcgctcttctccttcaccagcccggcggtcaaacggctgctgggttgg
aagcagggagacgaggaagagaaatgggcggaaaaggctgtggatgctctggttaagaaa
ctgaaaaagaagaagggagccatggaggagctggagagggctctcagctgcccgggtcag
gtcagtaactgtgtgaccatcccccgctctctggacgggcggctgcaggtgtcccaccgg
aaaggtctgccgcacgtcatttactgtcgggtgtggcgctggcccgacctgcagtctcac
cacgagctgaaggccctggagtgctgcgagttccccttcggcgccaaacagaaggatgtg
tgcatcaacccctaccactacaaacgagtggacagtccagtgctgccccctgtgttggta
ccgaggaacagcgagttcaacgccaagcatacaatgctgcctcgcttccgcaaccctcta
caacagaatgagccgcacatgccgcagaatgccaccttcccagaatcctttactcaggtc
aacacaatgcccgccccttttcccacctcgccggtaaacagctacccgagctcgccagga
agcggcagcagcagcgccaccttcccacattcgccatccagcacggaccccggcagtccc
ttccagatgccagacacccctcctcctgcctacatgcccccagaggagcagatgacgcag
gatatcccccagccgatggacaccaccctcctggctccaacattgcccatagagagtaac
aaccggccagatgtgcagccggtggcctacgaggagcccaagcactggtgctctattgtt
tactacgagctcaacaatcgcgtcggagaggccttccaggcgtcctccaccagcgtgctc
gtggacggcttcacagatccctccaacaaccgcaaccgcttctgcctcggcctgctctca
aacgtcaaccgtaactccaccatcgagaacacccggcggcacatcggcaaaggtgtccat
ctgtattatgtcggaggggaggtgtacgcagagtgtctgagtgacagcagtatcttcgtc
cagagtcgtaactgtaactatcaccacggcttccatcccacaaccgtgtgtaagattccc
agcggctgcagcctgaaaatcttcaacaaccaggagtttgctgagctgctggcccaatcc
gtcaaccacggcttcgaggccgtctacgagctcaccaagatgtgtaccatccgcatgagc
ttcgttaagggctggggagcagagtaccaccgtcaggatgtgaccagcacaccctgctgg
attgagattcacctgcacggccccctgcagtggttggataaggtgctaacccagatgggc
tccccccacaaccccatatcctccgtctcctag
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