Pseudochaenichthys georgianus (South Georgia icefish): 117448999
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Entry
117448999 CDS
T09629
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117448999 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117448999 (xpc)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117448999 (xpc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
117448999
NCBI-ProteinID:
XP_033942203
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Position
7:complement(27801006..27816767)
Genome browser
AA seq
913 aa
AA seq
DB search
MAKRRGGAAETEAGTKKLKPVLKKGCGAKARGKKKDAGNSIKQEEDEIKRKVQPKPRSST
KRGAERKKSNTSKTTTAVKTSKYFQSPVKEEADSEDDCNMVTSAAPAIMMKIMKTEEEEE
GSEEDDWEEVEELSGPLGPPGPSEPILPTQPVEIEIEIETSEVRKKKKRQAEFETYLRRM
MNKIKKDVLIDTHKVHLMCLIAGGMFCSSLCSEPDLLAITLSLLPTHYSNVAKERIDRNY
LSGLLKWFRATFTLNPSLSCEERPDPRALLERRLASLSGRDHQEMTHMFLLVLRSLQLFC
RLVISLQPIPLKAPSAKGKGAKTSPGAPGKGDTSQDTSKNSSPESKVSPGTKRGGNIKGG
RGGKKAKTIAIKEEDEKTITSGGQRPKNSKRRSIASKVTYKEESNSDEEKKEGGPSDEDE
FQATSEEGSEELEGGSKSKKGTKGKGKSKNTAAPKRRSSGGGGKEEGKEREVDDKKEEGI
TSIRKKQRSGNKAKGPGADEWLEVFLEKTSSWVCVHVEQGVGLPHLCSQYATTPVTYVVA
VDGHGFVKDLGRKYDPTWLTTSRKRRVDEDWWDETLGPFLGPEDERDKKEEKELQSRLMN
KPLPVSIAEYKNHPLYALKRHLLKYDAIYPATAAVLGYCRGEPVYSRDCVHSLHSKDTWL
KEARTVRLGEEPFKMVKGFSNRSRKARMASGQAEEKDLAVFGEWQTEEYQPPLAVDGKVP
RNEYGNVYLFKPCMLPVGSVHLRLPNLNRVARKLEMDAAPAVTGFDFHGGYSHAVTDGYI
VCEEHEEILRAAWAEEQEIQKQKEKEKKEKRVISNWTLLVKGLQIKEKLKQRYGKLNQGL
LQGEEAAGLSSDEEGDEGGSPSDKTASETLAMSWPQNKQAEEDGGSISGLKRTAKTKREK
KGQEKHMFPFEKV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcggagagggggtgcagcagagacagaggccggtacaaagaaactgaagccg
gttctgaagaagggctgcggagccaaagcgagagggaagaagaaagatgcaggtaatagc
atcaaacaggaagaggatgagatcaagaggaaggtccaacccaaaccacgttcctccaca
aaacgaggagcagaaagaaaaaaatccaacacgtctaaaacaaccactgctgtcaaaaca
agcaaatacttccagtcgccggtgaaagaggaggctgacagtgaagatgactgtaacatg
gtgacctcagcagcgcctgccattatgatgaaaatcatgaaaacagaggaagaggaggag
ggcagtgaggaggacgattgggaggaagtggaggagctctccgggccactgggtccacct
ggtccgtcggagcccatcctgcccactcagccggttgagatagagattgagattgagacc
tcagaggtcaggaaaaagaaaaagaggcaggcggagtttgagacttatctgaggcggatg
atgaacaaaatcaagaaggacgtgctgatagatacacacaaggtccatctgatgtgcctg
atagcgggggggatgttctgcagtagtctgtgcagtgaacccgacctgctggccataact
ctgtcgctgctgcccacacactacagcaacgtcgccaaggaacgcatcgaccgaaactac
ctttctggactgctcaaatggtttagagcaacattcaccctcaaccccagtctttcctgt
gaggagcgtccagacccccgggctctgctggagagacgtctggccagcctgtcgggcaga
gaccaccaggagatgactcatatgttcctgttggtcctgaggtctctgcagctcttctgc
cgattggttatttctttgcagccgattcctctcaaagccccatcagccaagggtaaaggg
gccaaaacatctccaggggccccaggaaagggagacacaagccaggatacatccaagaac
tcctctcctgagtcaaaggtctctcctggcaccaaaagaggggggaatatcaagggaggc
cgaggaggaaagaaagcaaagactatagcaataaaggaagaggatgagaagactataaca
tcaggagggcagaggccaaagaactcaaaacgccgcagcatcgcctcaaaagtcacctac
aaggaagaaagtaacagcgacgaggaaaaaaaggagggtgggcccagtgatgaggatgag
tttcaggcgaccagtgaggaaggcagtgaggagttagagggagggtctaaatctaaaaag
gggacaaaggggaaaggcaagagcaaaaacactgcagctccaaagagaaggagtagcgga
ggggggggaaaggaggagggaaaggagcgagaggtagatgacaaaaaagaagaaggaatt
acaagcatcaggaaaaagcaaagaagcgggaacaaggcaaaagggcctggagcggacgag
tggttggaagtgtttctggagaaaacatcttcctgggtttgtgtacacgtggagcagggt
gtcgggttgcctcacctctgctcacagtacgcaacaacgccggtgacgtacgtggtggcg
gtggacgggcacggctttgtgaaggacctggggaggaagtacgaccccacctggttaacg
acatccaggaagaggagggtggatgaagattggtgggacgaaacactagggcctttcctg
ggacccgaagatgagagggacaaaaaggaagaaaaggagctccagagcaggctaatgaac
aaacctctgccagtctcaatagcggagtataagaaccacccgctgtacgccctaaagagg
cacctgctgaaatacgatgccatctaccctgcaacagctgctgtcctgggatactgcagg
ggagagcccgtctactccagggattgtgtgcactccctccactccaaggacacttggcta
aaagaagcacggactgtcagactaggagaggagccatttaaaatggtgaaaggcttctct
aatcgttcccgtaaagccaggatggcgtctgggcaggcagaggaaaaggacttggctgtg
tttggagaatggcagactgaagaataccagccgcctttagctgtggatgggaaggttccc
cgcaacgagtacggtaacgtctacctgtttaagccttgtatgttgccggtgggcagtgtt
cacctcaggctgcccaacctgaaccgcgtggcgaggaagctggagatggacgccgccccc
gccgtcacgggcttcgattttcatggaggatactcacacgctgtcactgatgggtacatt
gtgtgtgaggagcatgaggagattctcagagcagcctgggcggaggaacaggagattcag
aaacagaaggagaaagagaaaaaagaaaagagggtgatctccaactggactctgctggtg
aaggggctccagatcaaagaaaaactcaaacagcgctacggaaagttaaaccaaggtctt
cttcaaggggaggaggccgctgggctttcttcagatgaggagggggatgaggggggaagt
ccttcagataagacggcatctgagactctggccatgtcctggcctcagaacaaacaggct
gaggaggacggggggagcatcagcggactgaagaggactgcgaagacaaaacgagaaaag
aaaggacaagagaaacacatgttcccatttgaaaaagtgtga
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