Pseudochaenichthys georgianus (South Georgia icefish): 117449132
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Entry
117449132 CDS
T09629
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117449132 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117449132 (herc3)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117449132 (herc3)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
HECT type E3
117449132 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
117449132
NCBI-ProteinID:
XP_033942442
LinkDB
All DBs
Position
1:complement(38867861..38892241)
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AA seq
1042 aa
AA seq
DB search
MLCWGNAKDGQLGIGLERNLLFEPRYCQVFNGRGLKDVACGGQHSIFLLQDGSVYTCGSN
SCGQLGQDKPGTSPELVAALDTQTIRMVSCGRAHSMAVNEQGQVFAWGAGEGGQLGLGTS
EVAVRIPRLVKRLCDHRISQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGEGSWGQLGHGSTNNELLPRRVLELMGTEVSQITC
GRQHTLAFVPSSCVVYAFGCNSHGQLATGAPGDASSPFPLKAGFLTGSFHRSVTKIICGG
DHGFLLYSNEESSAPPDDFRVMNVSKSISPINYERLNSWRLRLMYSTDSTVTNDIIIQLS
STACWNASFLEQSDDTHFKTNPKIAGIDLNSVRKLFETLSKPAFSGLQEQATKSFESLVI
PQLTCSPPDVEAMRIYLILSEYPVLLDSKNYIRLTIPLAMAILRLDANPAKVLDNWWCFV
DGSVFTRMVDMYKSIVVFMLTGGKTLLVPVFYENYFVATLRLLEKLHKVNLKARHVEYNR
FYIPDITNLVDIQEDYLKWFLSKADIKQSSSPSQSDFPSVNLCAYPFILNAQAKTTMLQT
DAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVFHVRRDHLVSDTLRELTMYSDVDLK
KPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDKCFVEQNWF
HLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVAPTLEDFKELSPTEARSLQQLLDYEGGD
VEEMFLLNFAITRENYGMTEVKELVPGGESISVDKNNRKEFVEAYLSYMFSDSVSDEYAA
FSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTVRLFWEV
FHEFPLEQKKQFLLFLTGSDRIPIHGMESMRIVIQSTTAEEHYLPVAHTCYNLLDMPRYQ
TKEILHRRLTRAVEQYEGFSLV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgctctgttggggcaatgcaaaggatggacagttgggaataggtttggagaggaacctc
ctatttgagccaagatactgccaagtgttcaatggcaggggactgaaagatgtagcgtgt
ggaggccaacactctatattcctgctgcaagatggcagtgtgtacacgtgtggttctaac
agctgtggacagctgggccaagacaaaccagggacttctccagagcttgtagcggcgctc
gacactcagaccataaggatggtgtcgtgtggtcgcgctcattcgatggcggtgaacgag
caggggcaagtgtttgcgtggggggccggtgaagggggccagctcggcctggggacctca
gaggtggctgttcgaatcccaaggttggtcaagaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcattgcactttcaaaagacggccagctgttcacgtgg
ggccagaacaccagcggtcagctcggcctggggaaaggagaaccgagcaagctgttccct
catcccctcaagtctctggcgggcattcctctggcacagataaccgccgggggggaccac
agcttcgctctctccctgtctggagctgtgttcggatggggcaaaaacagagctggacaa
ctgggtctcaatgataaacaagatcgtgctgtcccgtgccacatcaagtttctgagatct
caaaaagttgttcacatcagctgtggagaggaacatacagcggccctcacaaaggacggc
ggcttgtttacctttggtgaaggctcgtggggtcagctgggtcatggttccaccaacaat
gaactgttacccaggcgagtgctggagctcatgggcaccgaggtgtcccagatcacctgt
ggcaggcaacacacgttggcgtttgtgccttcctcctgcgtggtctatgcattcggttgt
aacagccacggccagctggccacaggagcaccgggggacgccagcagcccgtttcctctc
aaggccggtttcctgactgggagtttccacagatcagtgaccaaaatcatctgtggagga
gaccacggcttcctactgtactccaatgaagagagttctgcccccccggacgacttcaga
gtgatgaatgtcagtaaatcaatatccccgatcaattatgaaagattaaattcatggagg
ctaaggctgatgtacagcacagactccaccgtcacaaatgacattataatccaactctcc
tctacggcttgttggaacgccagcttcttggaacaaagtgatgatacccactttaaaacc
aacccaaagatcgcaggcatcgatctcaactctgtcagaaaactatttgagacgctcagc
aaacccgccttctctggacttcaggagcaggccaccaagagttttgagagtctggtgatc
cctcagctaacgtgctccccccctgacgtcgaggccatgaggatctacctcatattatct
gagtaccccgtcctgctggactccaagaactacatccgcctcaccatccccctcgctatg
gccatcctgcggctggacgccaaccccgccaaagtattagataactggtggtgttttgtt
gacggcagcgtgttcaccagaatggtcgacatgtacaagagcatcgttgtgttcatgcta
acgggaggaaagacgctgctcgtaccggtgttttacgaaaactattttgtcgccacactg
cgactgctggagaaactccacaaggttaacctaaaggcccgccatgtggagtacaaccgc
ttttatatccctgacatcaccaacctggtggacatccaggaagactacctcaaatggttt
ctgagtaaagctgacattaaacaatcatcctccccttcgcagagtgacttcccctcagtg
aacctttgtgcctacccgttcatactgaacgctcaagccaagacaaccatgctgcaaaca
gacgccgagctgcaaatgcagatggcagtgagcggtgcaaacctacacaacgtctttatg
ctgctcacgctggaaccccaccttgctaggaacccttacttggtgttccatgtgcgcagg
gaccatttagtgagtgacacactacgtgagctcaccatgtactccgatgtggatctcaag
aaacctctgaaggtgatctttgatggagaggaggccgtggatgcaggtggagtaactaaa
gagttcttcctgctgctcttaaaggagctgatggatcctgtttatggaatgttcacgcac
tacaaagagtccaacctgctgtggttctcagacaaatgttttgttgagcagaactggttt
cacctgatcgggatcatctgcggtctggccatctacaactccacggtggtggacctccac
ttccccctggttctctacaagaagctgctcgatgtggcgccaacgctggaggacttcaag
gagctctcccccaccgaggccaggagtctacaacaacttctggactacgaaggaggtgat
gtggaggagatgtttcttctcaactttgctatcaccagagagaattatgggatgacagaa
gtcaaagagctcgttcccggaggagagagcatcagcgtggacaaaaacaacaggaaagag
tttgtggaggcctacctgagctacatgttctcggactcggtgagcgacgagtatgcagcc
ttctcttcaggcttcttgaaggtgtgcggcggggagatcctgtcgctgttccagccctct
gagctgatggccatggtggtcggcaacaacaactacaactgggaagagatggagaagaat
gctgtgtacaaaggggaatatacagccacccatccaacagtcagattgttctgggaagtt
ttccacgagttccctctggagcagaagaagcagtttttattgttcctgacgggcagcgac
cgtatccccatccacggcatggagagcatgcgcatcgtgatccagtcgaccacagcggag
gagcactacctgccggtcgcccacacctgctacaacctgctggacatgccccgctaccag
accaaagagatcctgcatcgccgcctgacccgggctgtggagcagtacgagggcttcagt
ctggtctga
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