Pseudochaenichthys georgianus (South Georgia icefish): 117449144
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Entry
117449144 CDS
T09629
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03030
DNA replication
pgeo03410
Base excision repair
pgeo03420
Nucleotide excision repair
pgeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117449144 (rfc2)
03410 Base excision repair
117449144 (rfc2)
03420 Nucleotide excision repair
117449144 (rfc2)
03430 Mismatch repair
117449144 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgeo03032
]
117449144 (rfc2)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117449144 (rfc2)
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117449144 (rfc2)
DNA replication proteins [BR:
pgeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117449144 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
117449144 (rfc2)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117449144 (rfc2)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117449144 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
117449144 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_22
RCF1-5-like_lid
nSTAND_NTPase5
AAA_14
AAA_16
Viral_helicase1
AAA_11
Rad17
Mg_chelatase
MipZ
AAA_assoc_2
AAA_19
DEAD
AAA_18
nSTAND3
RuvB_N
AAA_5
DNAX_ATPase_lid
AAA_24
AAA_30
RNA_helicase
ABC_tran
SLFN-g3_helicase
MeaB
AAA_25
AAA_28
NTPase_1
AAA_23
AAA_2
MCM
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
117449144
NCBI-ProteinID:
XP_033942456
LinkDB
All DBs
Position
7:complement(3995261..3999959)
Genome browser
AA seq
358 aa
AA seq
DB search
MDDVEMVEPESEKTTTESGQKPDTGAGEASTKSSGVSYELPWVEKYRPLKLNEIVGNVET
VSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNERGIDVV
RNKIKMFAQQKVTLPKGRHKVIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDK
IIEPIQSRCAVLRYSKLTDGQILSRLQDVVEKEKLSVSDDGLEAVIFTAQGDMRQALNNL
QSTNSGFGYINSENVFKVCDEPHPLLVKGMLGHCVEGDIDKAYKVVEQLWALGYSPEDII
GNIFRVCKTFQMPEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCMKTAPPAAS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtggagatggtggagcctgaaagtgagaaaacaacaacggaaagcgggcag
aaaccggacacgggagccggggaggcttcgactaaaagctccggtgtcagctatgaactg
ccctgggtggagaagtaccgtccgctgaagctgaacgagattgtggggaacgtggagacg
gtgagccggctggaggtgttcgccagggagggaaacgtcccgaacattatcattgcaggt
cctccgggcacaggaaagaccaccagcatcctgtgtttggcccgagctctgctgggagcc
tccatgaaagacgccgtgctggagctcaacgcttcaaatgaaagaggaatcgacgtggtg
aggaacaagatcaagatgtttgctcagcagaaagtcacactgcccaaaggacgacacaag
gtcatcatcctggacgaggccgacagcatgacagatggcgctcagcaggcgttgaggagg
atcatggagatctactctaagaccacgcgcttcgctctggcctgtaacgcctcagataaa
atcatcgagccgatccagtctcgctgcgccgtgctgcgttactccaagctgacggacgga
cagatcctgtcgcggctgcaggacgtcgtggagaaggagaaactgtcggtgtcagacgac
gggctggaggccgtcatctttaccgcacagggggacatgagacaggctttgaacaacctg
cagtccaccaactccggcttcggctacatcaacagtgagaacgtcttcaaagtgtgcgac
gagcctcacccgctgctggtgaaaggcatgctgggacattgtgtggagggggacatcgac
aaggcgtacaaggtggtggagcagctgtgggcgctgggctactctccggaggacatcatc
gggaacatcttcagagtctgcaagaccttccagatgccagagtacctcaagctggagttc
atcaaggagatcggctacactcacatgcgggtggctgaaggagtgaactctctgctgcag
atggccgggctgctgggtcgcctctgcatgaagacagcgccccctgctgccagctga
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