Pseudochaenichthys georgianus (South Georgia icefish): 117449162
Help
Entry
117449162 CDS
T09629
Symbol
pkd2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117449162 (pkd2)
04040 Ion channels [BR:
pgeo04040
]
117449162 (pkd2)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117449162 (pkd2)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117449162 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
117449162
NCBI-ProteinID:
XP_033942490
LinkDB
All DBs
Position
1:complement(38928720..38940950)
Genome browser
AA seq
901 aa
AA seq
DB search
MSSSRVRPQQLPQSQTAKVPHKLDSGEGIEMENIQHQDLGLGGVVGTPSPPSRQAWSRDN
PGFEPEEEIMAADWPPASPGRRSVSTASSSSCSSGLGSFPGAGSSTHITRGGLYPTPTVD
ARQQDRHLHRGYLKQILQKIRILWGTELMEDSDSSRERYLRNVLREMVTYIAFLITVCIL
TYGMVSANMYYYTKVMSQLFLDTPLSAGDPSSFRSLSTMEDFWKFTEGPFLKGMYWEVWY
NNKSLPENQSLIYYENLLLGVPRLRQVKVRNESCSVHEDLRGEIQDCYNMYTPSNEDTAS
FGPKNGTAWMYTAESEMAGSGYWGQISKYGAGGYYQDLSRTREESATQLQFLKDHLWLDR
GTRAVFLDFSVYNGNINLFCIARLLVEFPATGGVLTSWQFQTVRLIRYVSSWDYFVGLCE
VAFCIFILYYVVEEVLEIHIHRLHYFKNLWNCLDVLIVVLSVVAIIMNVTRTAMVGDRMK
GLLENHSAHPSFEALATLQVQFNNVAAVIVFFSWVKLFKFINFNKTMSQLSGTMSRCAKD
LVGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQASIFTQFRIILRDFEFSEIEESNPVL
GPIYFTTFVFFIVFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLR
LKKTAVDDISDSLRQAGGKLNFDELRQDLKGKGHTDAEIQAIFAKYDHDGDQELTENEHQ
QMRDDLEKEREDLDLERNSLTRATSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSY
EEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLETMERAKLKRRDVLSRLLDGVMEDERLSR
DTDVHREQMERLVREELERWESDDVVSQASHAQPATPSGPRPPSSLSTDGLDTSTNASGH
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcccgagtcagaccacagcagctgccgcagagccagactgccaaggtgccg
cacaaactagactcaggcgaggggatagagatggaaaacatccagcatcaagacctgggt
ctcgggggagtcgtaggcaccccgtcccccccttccagacaagcctggagccgcgacaac
cctgggtttgagcccgaagaggagatcatggcagccgactggcctccagcgagtcccggg
aggaggtcggtgtccacggcctccagcagcagctgcagcagcggcctgggcagcttcccc
ggagcgggcagcagcacccacatcacccggggaggactctacccgaccccgactgtggat
gcccggcagcaggacaggcatctccaccgcggctatttgaagcagatactacaaaagatc
agaattctgtggggcacagagctgatggaggacagtgacagcagtcgagagcggtacctc
aggaacgtactgagggagatggtcacatacatcgcattcctcatcactgtttgtatcttg
acttatgggatggtgagtgccaatatgtactactataccaaagtcatgtctcagctgttc
ctggacacaccgctgtctgccggggacccttcctcttttagaagcctctcaaccatggag
gatttctggaagttcacagagggacctttcctcaaaggcatgtactgggaggtgtggtac
aacaacaagagcctgccagagaatcagagtctcatctactatgagaacctgctcctcggg
gtgccacggctccgacaggttaaagtccgcaacgagtcctgctccgtccacgaagatctg
agaggcgagattcaggactgctacaacatgtacaccccgtccaacgaggacacggcctcc
tttggccccaagaatggaactgcgtggatgtatacagcagagagtgagatggctggcagt
ggttattggggccagatatctaaatatggagctggaggatactaccaagacctgtcccga
acgagagaggagtcagcaacccaactgcagttcctcaaagaccatctgtggctggaccga
ggcaccagagccgtgttcctcgacttctccgtctacaacgggaacattaacctgttctgc
atcgccaggttgctggtggagttccctgcgacaggtggggtgctgacctcctggcagttc
cagactgtgcgtctgatccgatacgtgtccagctgggactactttgtgggtctgtgtgag
gtggctttctgcatattcatcctctactacgtggtggaggaagtgctggagatacacatc
caccgcctgcattacttcaagaacctgtggaactgtctcgatgtgctcattgtcgtgttg
agtgttgtcgccatcatcatgaacgtaacgcgaacagccatggtgggcgaccggatgaaa
ggcctgctggagaatcactccgctcacccgagctttgaggctctggccaccctgcaggtc
cagttcaacaacgtggctgcagtcatcgtcttcttctcatgggtcaagctctttaagttc
atcaacttcaacaagaccatgagccagctgtcgggcaccatgtcgcgctgtgccaaggac
ctggtgggcttcgccatcatgttcttcatcatcttcctggcctacgctcagctggcatac
ctggtgtttggaacacaagtcaacgatttcagcactttccaggccagcatatttactcag
ttccgcatcatcttgagggacttcgagttctcagaaatagaggagtcgaaccccgtgctc
ggaccgatctactttacaacctttgtcttcttcattgtctttattctcatgaacatgttc
ctggccatcatcaatgacacctactctgaggtgaaggccgacatgtcccagcagaggtct
gagatggaaatgacagatctcattaagaagggttgtaacaaagctttgatgaagttgaga
ctgaagaagacggcagtagacgacatctctgacagtttgcgtcaggccgggggaaaactc
aacttcgatgaactgcgccaggatctgaaagggaagggccacacagacgcagagattcag
gccatctttgccaagtacgatcacgatggagaccaggagctgacggagaacgaacaccag
cagatgagagacgacctggagaaagagagagaagacttggatctggaacgcaattcgctg
acgagagccaccagtgggcggagcttccctcgcactcaggacgactcggaggaagacgat
gacgaggacagcggccacagctcgcgacgccgcggcagcagctccgggggggtctcctac
gaagagtttcaagtgctggtgcggcgtgtggaccggatggagcactccatcggcagcatc
gtgtcaaagatcgacgccgtgatcgtgaagctggaaacgatggagagagcgaaactcaaa
cgcagagacgtgctgagccgactgctggacggagtcatggaggacgagcgtctgagccgg
gacacagacgtccacagggagcagatggagcggctggtgagggaggagctggagcgctgg
gagtctgacgacgtggtgtctcaggccagccacgctcagcccgccacccccagcggcccc
cgccccccatcctcactctccaccgacggccttgacaccagcaccaacgcgagcggccat
gtgtga
DBGET
integrated database retrieval system
