Pseudochaenichthys georgianus (South Georgia icefish): 117449167
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Entry
117449167 CDS
T09629
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04120
Ubiquitin mediated proteolysis
pgeo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117449167 (ube4b)
04120 Ubiquitin mediated proteolysis
117449167 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117449167 (ube4b)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117449167 (ube4b)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
U-box type E3
117449167 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117449167
NCBI-ProteinID:
XP_033942501
LinkDB
All DBs
Position
7:23272508..23291935
Genome browser
AA seq
1376 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGVAPQPPAASQ
SLGLNVHSCTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTA
SCEKSMSQVDVDSGIENMEVEDSDRREKRNLTDKETSANSDVSEEQALQLICKILRVSWK
EQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSSHSRVQNPFASLTATSQP
IAAAKSPDHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLYGCGSPHPMSLDAANRTFPSL
PSPTTPSLPSTPSTPQFIVPPSPTATTALRPSLNPPSAPMPISQRYRPYSVTSPWGAPSP
SSPGQRGFTFSGPSPSPAGPSVPPNTPVPVPPTSPQTLTLSSSRAHNQASSTPPPIVPPS
PRTNARQSAFASRIPPSSPLSVLFSALSDMSQDSSDEESQEEEDFARVQFGSSLVCGGGM
SCDTASDRFTIETCKETEMLNYLIERFDSVGMEERKAPKICSQPNASQLLSNIRSQCISH
VALVLQGTLTQPRSPLHQSLLVPYLLCRNLPYGFIQELVRITQQEEEVFSQIFIPILRGL
ALAVKECSFDSDNFKFPLMALAELCEIKLGKTHPVCSLATSLPLWCPKPLSPGCGREIQR
LSYVGAFFSLSVFAEDDTKVGDKYFSGPAITIENTRVVSQSLQHYLESARGDLFKILHNI
LLNGETRESALNYMSALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVD
PYYIFHPRCRLVVSLEETRVKATMEELKSWLTDMQDDPSKFSEPKFPTECFFLTLHAHHL
SILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAK
ACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNINLPLHPEIPKSFAALPEFYIED
VAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQP
RTQRFSEMMENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNL
AHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRE
QQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQ
LCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVI
SKMRKAGIKSSIAIEKFKLLSDKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVIL
PSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGRPV
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagattcgcagaaggagactggcacgactggcaggtgga
cagacgtcacagcccagcacccctctcagcacacccctgacatccccacagagagagacc
ccccctggacccctccctggaccctcaggtgttgccccccagccaccagctgcctctcaa
tcattggggctcaatgttcacagttgtacaccggccacatcccctatgggtacctctggg
gtggcatatggaagtcagagcagtgagggtgtgagctccctctccagctccccctccaac
agccttgagactcagtcccagagtctgtcccggtcacagagcatggacattgacactgct
tcctgtgaaaagagcatgtcccaggtggatgtggactcagggatcgagaacatggaggtg
gaggacagcgatcgcagggagaagaggaacttgactgacaaggaaacctctgcaaactca
gatgtctcagaagaacaggctctgcagctcatttgtaagatcctccgcgtatcgtggaag
gagcaggacagagatgtcatctttctcccttcactggctgcagagttccaccagaaccct
aaagatgtatactctgacttcaaagacctgattggccagatcctgatggaagtcttaatg
atgtcctcccattcacgcgtccaaaacccattcgccagcttgaccgccacttctcagcca
attgctgcagccaaatcccccgaccaccgcctgacgctggtgcagccctccagccaaggt
ggcagcccgatgggccccagtgcagggtcctttggggccagctctctgtccagtctgtat
gggtgtggtagccctcacccgatgtctttggatgcagccaataggaccttcccatctctc
cccagtcctactacaccctctctaccttccacaccctctaccccacagttcattgtgccc
cctagcccaactgctactaccgctctgagaccatctctcaaccccccatctgcacccatg
cccatctcccagcgctatcggccttactctgtcacctctccctggggggctccttcccca
tccagccctggtcaaagaggatttaccttctctggaccttctcctagccccgcaggaccc
tctgttcctccaaacaccccagttcctgttccaccaaccagcccccagaccctcaccctg
agctcatctagggctcacaaccaagcctcctccacaccccctcccattgtgcccccttct
cccagaacgaatgcccgacagtctgcctttgcttccaggatcccaccatctagccccttg
tcggtcctattctctgccctctctgacatgtctcaggacagcagtgatgaagaatctcag
gaggaggaggattttgcaagggttcagtttgggtccagtcttgtttgtggaggggggatg
tcctgcgatacagccagcgaccgcttcaccattgaaacatgtaaagagacagagatgctg
aactacctcattgagcgctttgacagtgttggcatggaagagaggaaagctcccaagata
tgcagccaaccaaatgccagccagcttctcagcaacattcgctctcaatgtatttcccat
gttgccctcgtcctgcagggcaccctgacacagccacggagccctctccatcagtctctg
ctggtaccttatctgctgtgtcggaacctcccgtacggctttattcaggagctggtgcgc
attactcagcaggaggaagaggtcttcagtcagatctttattcccatcctccgggggctt
gctcttgcagtaaaagaatgttcctttgacagtgacaactttaaattccctcttatggca
ttagctgagctttgtgaaatcaagctcggaaagactcacccagtctgcagtttggctacg
tctttgcctctgtggtgtcccaaacctctgagccctggttgtggccgagagatccagaga
ctgtcctacgtgggagccttcttcagcctctctgtgtttgctgaggatgatacgaaagta
ggagacaagtatttctctggccctgccatcaccatagagaacacacgagtggtcagtcag
tccctgcagcactacctggagtcagcaaggggtgacttgttcaaaattctccataacatc
ctactaaatggggaaactcgcgagtcagctcttaattacatgtcagctctagtcaactac
aatgtgaagaaagcccagatgcagaccgatgataagcttgtgtcgacagacggcttcatg
ctcaacttcttatgggtgctgcagcagctcagcatgaaaataaagctggagaccgtggac
ccttactacattttccacccccggtgtcggcttgtcgtcagcctagaggagacgcgtgtg
aaagccaccatggaggagctcaagagctggctgactgacatgcaggatgacccaagcaag
ttctcagaacccaagttccccaccgagtgtttcttcttgacgcttcacgcccaccatctg
tccatcctgcctggctgcaggcgttacatccgcaggttgcgggctatccgagaactgaac
aggactgtagaggagctgaagaacagtgagagccaatggaaagattctcctctagctagt
cggcacagagagatgctcaagagatgcaaaacccagctcaagaaactggtgcgagccaaa
gcttgtgctgacgtgggtcttctggatgagaacctgctccgcagatgtctgcagttctac
agcacagtcatccagctcattctgcgcatggtggaccccgcctaccccaacattaacctg
ccactgcacccggagattcctaaaagctttgctgctctgcctgagttctacattgaagat
gtggcagagtttctgctttttgtcgtgcagtattccccccaggttttatatgagccctgt
gtgcaggacatagtcaccttcttggtggtgttcatctgcagtcagaactacatcaggaac
ccttaccttatcgccaagttggtggaggtgctgttcgtcaccaaccctgccgtacagcct
cgtactcagcgcttctctgaaatgatggagaaccacccattgtctatcaagcagctggtt
cccgccctcatgaagttctacactgatgttgagcacaccggagccaccagcgagttttat
gataagttcactatacggtaccatataagcactatcttcaagagtctgtggcagaacctt
gcccaccatggcaccttcatggaggagttcaactctggcaagcagtttgtgcgctacatc
aacatgctgattaatgacaccaccttcttgttagacgagagccttgagtccctgaagcgt
atccacgaagttcaagaagaaatgaaaaataaggagcagtgggaccagctgcctagggag
cagcagcagagccggcagtcccagctgactcaggatgagcgtgtgtctcgctcctacctg
gccctcgccacagagacggttgaaatgttccacatcctcaccaagcaggtccagaagcct
ttcctcaggcctgagctggggcctcgtttagccgccatgctaaacttcaacctccagcag
ctctgcgggcccaagtgtcgggacctgaaagtagaaaacccagagaagtatggctttgag
cccaagaagctcttagaccagctgactgacatctacctgcagctagactgtgcacgcttt
gctaaagccattgcagatgaccagcggtcgtacagccgtgagctctttgaagaggtcatc
tcgaagatgaggaaggctggtattaagtcttctattgccattgaaaaattcaagctgcta
tcggacaaggtggaggaaatagtcgccaagaactcccaatccgaaatggactacagcgac
gcacctgacgagttcaaagaccctctgatggacacactgatgactgaccctgtgatattg
ccttcgggaaacatcatggaccgatccatcatcctgcgccacctgctcaactcccccact
gatcccttcaacaggcagcctctcacagagagcatgctggagtcagtccctgagctgaag
gagaggatccacacctggatgagagagaaacagggcggacggcctgtctga
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