Pseudochaenichthys georgianus (South Georgia icefish): 117449172
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Entry
117449172 CDS
T09629
Symbol
lhfpl5b
Name
(RefSeq) LHFPL tetraspan subfamily member 5b
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117449172 (lhfpl5b)
03037 Cilium and associated proteins [BR:
pgeo03037
]
117449172 (lhfpl5b)
Transporters [BR:
pgeo02000
]
Other transporters
Pores ion channels [TC:
1
]
117449172 (lhfpl5b)
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117449172 (lhfpl5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
DUF6677
Motif
Other DBs
NCBI-GeneID:
117449172
NCBI-ProteinID:
XP_033942512
LinkDB
All DBs
Position
7:complement(21473047..21476958)
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AA seq
219 aa
AA seq
DB search
MDLLPAQEAAKIYHTNYVRNSRAIGVMWAVFTICFVIITMVVFIQPYWIGDSVNTPQAGY
FGLFHYCIGNALTSELVCKGSVLDFASIPSPAFRTALFFVGTSMLLIVGTMVCFSLFFFC
NAGNVYKICAWMQLASALLMVMGCMIYPDGWDSPEVKRMCGQRTDKYSLGNCTVRWAYIL
AIISILDALLLALLSFTLGNRQDKLLPDNFEVEGGAANP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcttcctgcccaggaggctgctaaaatctaccacaccaactatgtgagaaac
tctcgagccatcggcgtgatgtgggccgtgttcaccatctgcttcgtcatcatcaccatg
gtggtcttcatccagccgtactggatcggggacagcgtgaatactccgcaggccgggtac
ttcggcctcttccactactgcatcgggaacgcgctcacctcggagctcgtgtgcaaaggc
agcgtgctggacttcgcctccatcccttctccggccttcaggaccgccttgttcttcgtg
gggacctccatgctgctgatcgtgggcaccatggtctgcttcagcttgttcttcttctgc
aacgccgggaacgtgtacaagatctgcgcgtggatgcagctggcctcagccctgctgatg
gtgatgggctgcatgatctacccggacggctgggactctccggaggtgaagaggatgtgt
ggccagaggacggataagtacagcctggggaactgcacggtgcgctgggcctacatcctg
gccatcatcagcatcctggacgccctcctcctggcgctcctgtccttcacactgggaaac
aggcaggacaaactgctgccagacaactttgaggtggagggaggagcagcaaacccctga
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