Pseudochaenichthys georgianus (South Georgia icefish): 117449190
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Entry
117449190 CDS
T09629
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117449190 (pcdh10a)
Cell adhesion molecules [BR:
pgeo04515
]
Cadherins
Protocadherins
117449190 (pcdh10a)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117449190
NCBI-ProteinID:
XP_033942590
EnsemblRapid:
ENSPGEG00000016385
LinkDB
All DBs
Position
1:complement(12472510..12494917)
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AA seq
1052 aa
AA seq
DB search
MIWLILLLSILHGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTTPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGNKFAE
LVLEKSLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQSVYSVNLRE
NSPVGTLIIQLNATDVDEGQNGEIVYSFSSHNTPRVKDLFNIDARTGRIEVAGEVDYEES
STHQIYVQAKDMGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSGENGHMSCEVLGDVPFKLKSSFKNYYTIVTDGPLDRENTDSYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSAMDPDIGQNALITYS
ILECEIQGMSVDTYVSINQDTGYLYALRSFDYELLKEFSFMVHAKDGGDAELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIMAMDSDDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRNGDRGSASKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKIDLYTCLLAG
ECCMCCSSCCSRQSRGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGAIVTGYSDQQPDIIS
NGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRG
HSAGTDLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVPS
SANLPDQLTMASSTASSNDRSFSTFGKDGQRSQSHQSLHHHLHQQQPQYSSSTLERKEYD
RGTLPYKPTFLCEYQYENSLGPYDFGLVQNRY
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaatactccttctctccatcctgcatggagctgtttctcagctacactac
tccgtgccagaggagcaggagcctggctccgtggttgggaatattgcagaggatttgggg
ctggacattaccaaactttccgctcgccgtttccagacggtgcccagttcgcggacacct
tatctggaggtgaacttagagaacggagcgctcgtggtgaaggagaaaatcgaccgagaa
gaaatctgcaagcaaaccaccccgtgcctattgcacctggaggtgtttctggagaacccg
ctggagctgtttcgcgttgaaattgaagtgatggatatcaacgacaatccacccagcttc
cctgagacggacatttccgtggaaatatcggagagcgccatccccgggacccgtttcccg
gtagagaacgccttcgacccggacgtgggcacgaacgctctcagcacatatgccatcacg
aacaataactatttttaccttgacgtgcagacacagagtgacgggaacaagttcgcggag
ctggtgctagagaagtctctggaccgggagcagcaggctgtgcaccggtacgtgctgacg
gctgtggatgggggcatcccgcagcgcaccgggacggctctcctggtcgttaaagtgctg
gactcgaacgataacgcgcccacctttgaccagtcagtgtactctgtgaatctgcgggaa
aactctcccgtgggcactctgatcatccagctcaacgccacagatgttgacgagggacaa
aacggggaaatagtttattccttcagcagccacaacaccccgcgggtaaaggacttattc
aacattgacgccaggacaggtaggatagaggtggcgggagaggtggactacgaggagagc
agcacgcaccagatttacgtccaggctaaagacatgggggctaatgcggtccccgcgcac
tgcaaagtgctggtgaaactcgtggacgtgaacgacaacacaccggagattggtttcagc
actgtgaccgagtccgtgagcgagcaggacgccccgggcaccgtcatcgcactctttagc
gtctcagaccgggactccggcgaaaatggacacatgagctgcgaggttttgggagacgtt
cctttcaagctcaaatcctcctttaagaactactacactatcgtgacagacggaccactg
gacagagagaacacagactcctacaccatcaccgtggtggccaaagataaggggcagccg
tcgctcgccaccagcaagtccatcaaagtgcacgtctccgatgagaacgacaacgcgccc
cgctttacgcaggctgtttatgatgtttatgtgactgagaataacgtgcccggggctttc
atccacgctgtgagtgccatggaccctgatataggacaaaatgctctcattacctactcc
atattggagtgtgaaatacagggcatgtccgtggacacgtatgtatccataaaccaggac
accggctatctttacgcgctgcgctcttttgactacgagctgctgaaggagtttagtttc
atggtgcatgctaaagacggtggcgatgccgagctcttctctaacgccactgtcaatgtg
atcatagtggaccagaatgacaacgcacccactgtcatagcccccatcggtaagaacggc
acagccaaagagcacctgccgcgctctgctgagcccgggtacctggtgacgcgcatcatg
gctatggattcggatgatggcgagaacgcacggctgtcctacagcattctgcggggcaac
gagatggggatgttccgcatggactggaggacgggggagctgaggacagcccgcaggatc
tcccccaagagggacccgcagggctactacgaccttctgatcgaggtgagagaccacggg
cagccccctctctcctcttctgcgagtgtgagtgtaatattagtggacagcgtggtggag
ggccgcaatggggaccgcggctcggcctccaaggcgaaggagacctcccttgacctcacc
ctcatcctcatcattgccctgggctctgtgtcattcatcttcctcctggccatgatcgtg
ctggccgtgcgctgccaaaaggacaagaagatcgacctgtacacgtgcctgctagccgga
gagtgctgcatgtgctgtagctcgtgctgcagcaggcagtcccgcggccggaagcagaag
aagctgagcaaatccgacatcatgttggtccagagcaccaacgtgacgtcaggggtcggg
cccgtgggtcaggtgcccgtggaggagtctggtgtgggcggcgtgggagggggcttcggc
tcccaccaccagaaccagaactcctactgctaccaggtgtgtctgacaccagagtcagcc
aaaacggatctgatgttcctgaaaccgtgcagcccctcccgcagcacggatacggatcac
accaacccctgcggcgccatagtgacgggttacagtgaccagcagccggacatcatatcc
aacggcagcatcctctctaatgagacgaaacaccaacgagcagaactcagctacttggtg
gaccggcccagacgtgtcaacagctctgcattccaagaggcagacatagtcagctccaaa
gacagcgggcatggcgacagcgaacagggcgacagtgaccatgatgccaccaaccggggt
cattctgccggcactgacctgttctccaactgcacggaggagtgcaaggccctgggtcac
tcagaccgctgctggatgccctcctttgtgccgtccgacgggcgccaggggccggactac
cgcagcaacctgcacgtccccggcatggacgccacgttgcccgacactgaggtaccctcc
tctgccaacctgcccgatcaactcaccatggcctcgtccaccgcctcgtccaacgatagg
tcattctccacctttggcaaggacggtcaaaggtcacagtcacaccaaagccttcaccat
cacctccatcagcaacagccgcagtacagctccagcacgctagagaggaaagagtatgat
agggggaccctaccatacaaacccacctttctctgtgagtatcagtatgaaaattccctg
ggaccctatgactttggtctggtccagaacagatactaa
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integrated database retrieval system
