Pseudochaenichthys georgianus (South Georgia icefish): 117449198
Help
Entry
117449198 CDS
T09629
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117449198 (ccdc187)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Other autophagy associated proteins
Others
117449198 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Nup96
Motif
Other DBs
NCBI-GeneID:
117449198
NCBI-ProteinID:
XP_033942560
LinkDB
All DBs
Position
7:10450052..10475108
Genome browser
AA seq
806 aa
AA seq
DB search
MMAELEIDQSNLPRVQEVCQSFAVLEDGVLAHNLQEQEIEQYYTTNIQKNQLVQNDIRVA
KMLQDEEEEEQAIQSTLSRHASRQLEEEDFEYARLIQEEIQRCSEQTRRREQEDEEIAKR
LQEEEKQRITRRSRGQGSEGSTSGPALPSPHQHTLSSPHQGEEQYSSSTSRWQCSTSLNH
SDLTRPQADSLRGVAAQRNTHSGSNQGHADSKRGIRGERVSEDSEDSDTVFSEQLTVWSQ
RLNERLHTAPPRRRASSNQPEERNCRSLSSRSSFTEQERGELNQEHYENAELEERRPRVW
DQARRHSEEYEGSHRSRDQDKDCRLVEVREKRCSRSESVGLHDGGQHNNKDLARTWSYRD
NPDKRVHFQDNSRSSIRPQQGKSRGVWEMLGQVLRERGVPVRLGGNGAPLQIGPQSRDSQ
VLHGSEVSCGDSLPHQRVFQRAANTRHSFHGDTWERRRSSHRENSGRDHTEDRLRNNVEH
DEKVYEISRRDSHLPSRERGGSRRWKEHGYTNDDERERNPNGSRVKRTTSERRRWHQTIE
ERLSSEEEVERRVERPHRRASQRSQSLSSSSRAPTGDRSRHEAAGGSLQPEPVGESLDLG
ELHQVLKDEELAQKLQEEEDKLLRRNTEPSPCSPYPEGDFRAAQVAQDEEIARFMQKQEM
KTKRRSRELEGPSSWREHRSMISHHDRRASRDRPVQRERLDSEGLPSPPEDGSPDNQPPS
TFSTIPHAQPIRNIAEELDPTFRAGRPDPESLRVGQAGPTCQSLPIPHPGLHELLEEPAF
IPPTKRQTDKSARSKPKEKKENCKQQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagagctggaaattgaccagtctaaccttcctcgtgtccaagaagtgtgccag
agtttcgcggtgctggaggatggagtgttggcacacaacctgcaggaacaggagatcgag
caatactacaccaccaacatccagaagaaccagctcgtgcagaatgacatccgcgtagcc
aagatgctgcaggatgaggaggaagaggagcaggccattcagagcaccctctccagacac
gcctccagacaactagaggaggaagactttgagtacgcccgtttaatccaggaggagatc
cagcgctgttctgagcagacccggaggagggagcaggaggatgaggaaatcgctaaacga
ttgcaagaagaggagaagcagagaatcacgaggcggagcagagggcagggcagtgaaggc
agcaccagtggtcctgcactgccatctccacaccagcacacactcagcagcccacaccaa
ggagaggagcagtactcatctagcaccagcaggtggcaatgttctacctctctcaaccat
tcagacttaactcgtcctcaggctgactccctcaggggggtagcagctcagagaaacaca
cattcagggtcaaatcaaggacacgcagattccaaaaggggaatcaggggtgagcgtgtg
agtgaggattcagaggactcggacacagtgttctctgaacagctcactgtctggtcccag
agactgaatgaaagactccacacggcaccccctcgacgacgggcatcttcaaatcagcca
gaagagagaaactgtagaagtctttcctctcgtagcagctttacagagcaagagagagga
gagttgaatcaggaacattatgaaaatgccgagctggaggagaggaggcccagggtttgg
gatcaagcaaggcgccatagtgaggagtatgagggttcgcacaggagcagggatcaggat
aaagactgtaggttagtggaagtaagagaaaagcgatgtagtcgtagtgaatctgtcggg
ctacacgacgggggtcaacacaacaacaaagacttagcgaggacctggagctatagggac
aaccccgacaaacgtgtgcattttcaggacaactccaggagctctataaggccgcagcag
ggtaagagcagaggagtctgggagatgctgggccaggtcctcagagagaggggcgtgcca
gtgaggttgggcggcaacggggcgccacttcaaatagggcctcaaagcagagacagccag
gtgcttcatgggagtgaggtctcctgcggcgactccctaccacatcagagagtcttccaa
agagctgccaacaccaggcacagtttccatggagatacctgggaaaggaggaggtcgtca
caccgagagaacagtgggagagatcacacagaagaccggctgcgaaataatgtggagcat
gatgaaaaggtttatgagattagtcggagagactcacatcttcctagcagagaaagggga
ggcagcagaaggtggaaagagcacggatacactaatgatgacgagagggagaggaatcca
aatggcagcagggtcaaaaggacaacgagcgaacgcaggcgttggcaccagaccatagag
gaaaggttgagctcagaggaggaggtggagaggagagtggagcggccccatcgcagagcc
tcacagcgcagccagagcctcagcagcagcagccgggctccaacaggagataggtcgagg
cacgaggcagcaggagggtcattgcaaccggagccagtgggggagagcctggacctgggg
gagctgcatcaggtcctaaaggatgaagaacttgctcaaaagctgcaggaggaagaggac
aagctgttgaggaggaatacagagccctctccatgcagtccttacccagagggagacttc
agagccgcacaagtggcgcaggacgaggaaatagcccgctttatgcagaagcaagaaatg
aagacaaagcgaagatcccgcgagctcgaagggccgtcgtcgtggcgcgagcacagatcg
atgatcagtcatcacgacagacgggcttcaagagacagaccggtccaacgagagaggctt
gactcagagggccttccgtcccctcctgaggacggctccccagacaaccagccacccagc
accttctccacaataccacacgcccagccgatcagaaacattgcggaggaactggacccg
accttcagggccgggaggccggaccccgagagcctcagagtgggacaggcaggtccaacc
tgtcagtcacttcctataccacatcctggcttacacgaactactcgaggagcctgctttc
atcccacccacaaaacggcaaacggacaaatcagcacgctcaaaacccaaagagaagaag
gaaaactgcaagcaacaataa
DBGET
integrated database retrieval system
