Pseudochaenichthys georgianus (South Georgia icefish): 117449225
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Entry
117449225 CDS
T09629
Name
(RefSeq) keratin, type II cytoskeletal 8-like
KO
K07605
type II keratin, basic
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117449225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117449225
04147 Exosome [BR:
pgeo04147
]
117449225
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117449225
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117449225
Exosomal proteins of other body fluids (saliva and urine)
117449225
Exosomal proteins of colorectal cancer cells
117449225
Exosomal proteins of bladder cancer cells
117449225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
FPP
ADIP
Laminin_II
Baculo_PEP_C
BRE1
COG6_N
DUF6236
Phage_GP20
DUF745
PUMA_CC
DUF7310
CENP-Q
RWD
COG5_N
TolA_bind_tri
Cob_adeno_trans
ACBP4_C
APG6_N
Motif
Other DBs
NCBI-GeneID:
117449225
NCBI-ProteinID:
XP_033942625
LinkDB
All DBs
Position
7:35410228..35415660
Genome browser
AA seq
544 aa
AA seq
DB search
MTSFKKSSYSVRSSNAPRSFSSMSYSGPSAGSRSSSSFSVKNSYGGGNRNFGGITSSSAY
GLNSSMGGGSMGMSGGMGMGGGMGMGGGSGMGMGMGHGPITAVTVNRSLLAPLNLEIDPT
IHGVRTHEKEQIKTLNNRFASFIDKVRFLEQQNKMLETKWNLLQGQTTTRSNIDAMFEAY
ISNLRRQLDGLGNDKMKLEADLHNMQGLVEDFKNKYEDEINRRTECENDFVLIKKDVDEA
YMNKVELEAKLESLTDEINFLRSIYEEELHELQSQIKDTSVVVEMDNSRNLDMDSIVAEV
KAQYEDIANRSRAEAETWYKSKYEEMQTSASSYGEDLRSTKTEISDLNRMIQRLTSEIDA
IKGQRANLEAQIAEAEERGEMAVKDARARIRDLEEALQRAKQDMARQIREYQDLMNVKLA
LDIEIATYRKLLEGEEDRLVNGIQSVNISQQSSSYSGFPSNKSSYSSGYSSGYSGGYGGG
YGSSSMGSSNMGSSNMGSGNMRDFSSGSSGGGYTTTQSKKNVVIKMIETKDGRVVSESSE
VIED
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttcaagaaaagctcttacagtgtgagaagttccaacgccccaaggagcttc
agcagcatgtcctactctggaccgagcgcaggcagccgcagcagcagtagcttcagtgtc
aagaattcctatggaggaggcaacaggaactttggaggcatcaccagctcctctgcctat
ggcctgaactcaagcatgggtggcggaagcatgggcatgagtggaggcatgggaatgggt
ggaggcatgggaatgggtggaggttcaggcatgggaatgggaatgggtcatggacctatc
accgccgtcactgtgaacaggagcctcctggcccccctgaaccttgagattgaccccaca
atccatggtgtccgaacccatgagaaggagcagatcaagaccctcaacaaccgctttgct
tccttcattgacaaggtccgcttcctggaacagcagaacaaaatgctggagaccaagtgg
aacctgctgcagggacagaccaccacccgctccaacatcgacgctatgttcgaggcctac
atctccaacctgcgcagacagctcgacgggctcggcaacgacaagatgaagctggaggcc
gacctgcacaacatgcagggcctggtggaggacttcaagaacaagtatgaagacgagatc
aacaggcgcacagagtgtgagaatgactttgttctcatcaagaaggatgttgatgaggcc
tacatgaataaggttgagctggaggccaagctggagagtctgacagatgagatcaacttc
cttaggtccatctatgaagaggaacttcatgagctccagagccagatcaaggacacttcc
gtcgttgtggagatggacaacagccgcaacctggacatggactccatcgttgctgaagtc
aaggctcagtatgaagacatcgccaaccgcagccgtgctgaggcagagacatggtacaag
tccaagtatgaagagatgcagacctccgccagcagttacggagaagatctgagaagcacc
aagacagaaatatcagacctcaaccgcatgatccagaggctgacatcagagattgatgct
atcaagggacagcgtgccaacctggaggcccagatcgctgaggctgaggagcgcggtgag
atggcagtgaaggacgccagggcccgcatcagggaccttgaggaagccctgcagagagcc
aaacaggacatggcccgccagatcagagaataccaggacctgatgaacgtcaagctggcc
ctggacattgagatcgccacctacaggaaacttctggagggagaggaggacaggctggtc
aacggcatccagtcagtcaacatttcccaacagagctcaagctacagtggtttccccagc
aataagagcagctactcaagcggctactccagtggttacagcggtggatacggaggtgga
tatggcagcagtagcatgggcagcagtaacatgggcagcagtaacatgggcagcggtaac
atgcgcgacttcagcagcggaagcagcggcggcggttacactacgacccagagcaagaag
aacgttgttatcaagatgatcgagaccaaggatggcagagtggtgtccgagtcctctgag
gtcattgaagattga
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