Pseudochaenichthys georgianus (South Georgia icefish): 117449262
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Entry
117449262 CDS
T09629
Name
(RefSeq) neural cell adhesion molecule L1.1-like
KO
K06550
L1 cell adhesion molecule
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117449262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117449262
04090 CD molecules [BR:
pgeo04090
]
117449262
04091 Lectins [BR:
pgeo04091
]
117449262
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
L1 family
117449262
CD molecules [BR:
pgeo04090
]
Proteins
117449262
Lectins [BR:
pgeo04091
]
I-type lectins (Siglecs)
117449262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
117449262
NCBI-ProteinID:
XP_033942711
LinkDB
All DBs
Position
7:complement(6468745..6532059)
Genome browser
AA seq
1272 aa
AA seq
DB search
MCVSQWTGYRGPVSPTLPLLLLPLLLSFFSSTPPLAQGAISIPENLSEPPELTELPLSYT
VFSHEDINLPCEATGNPSPTFRWVKDGEAFGSVREEFGTLRAQDEEKTLDSYGGYYRCYA
SNTLGTAMTQSVHLIVEPQPVLLKQQRVDKKANEGDSVILACNPPNSSTPPHIHWMDRRM
VHIKLNDRVMVGLDGNLYFSNLIKTDSRRDYSCNAQYTAARTVLPLPAVHLTVIQSNDLV
HGKKPDFFHPVGSHSSVQALTSHSVVLECLPKGLPTPKMEWKKKDGSLEETSGRVDSDSH
GRWFRFDSIEQNDDGEYECVASNNHGSVSHSFTLTVEAPPYWVKKPQSQRYAPGETVRLD
CQAEGIPAPKISWSINGELLSDVDDDPRRRVSGGVMILIDVVFTDTAVYQCVASNEHGSI
LLNIYLYVVELPPQILTSDAKVYKFTEGGSVVMDCESFGSPRPHITWEGDDRLPLLSDPR
VALLTNGSIIVSDVSHEDSGEYSCSIKYSNISISAHLEVYNQTVILNGPQDVRVLRGSSA
LLDCVFQKDPRLIKYQIVWKKAEHKMQESSPDDKHTIFDNGTLKVTNIQSDDSARYSCEV
ITALGSVTASGSITVVARPDSPEGLSLSDVADHSLTLSWNPGKSHNSPIIEFIVEAREEQ
HAEHGRWRWEEWKRVPGEFNHLELTLHPYCTYRFRVFAVNEIGRSDPSHFSDHHKTPPAV
PDRNPSGVRSESTDPKTMIITWDEMDKRFHSGEGFKYHVSWRGGGDAQWNHADVATPPYV
INDTGTYTPFEIKVQAVNDVGGAPTPEPEIGYSGEDEPQEAPTNVSTKVMDSTVTVKWKE
AQNVRGLLLGYKIYLQRLGPQGSRVRRSLGKQHQKREDKLGRARERDREVVVHGVKTSEE
VTGLRLYSSYELSVAAFNSKGEGPRSPPHHFSTPQGAPGPPASLRLESPSEKSMLLYWSP
PEETNGILQGYVVQYREDLENSLLQMEYIDDPTVTHFELDSLDPSSHYIFNVIASTIVEG
PPITRRGATALDGVAPSHINIVPSNTSLNLSWVHGERFRNHGFIIRYRRKSPGCDWLDSE
VVNSTQGFYSLKGLLPGSEYQLVINDTQWENSTRTIGAAPSVMPGGFAARGWLIGLIAAI
LLLVLILLILCLIKRSKGGKYAVKDKEDKEGDSEARPMKDETFGEYSDADEKRSESQPSL
CGESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSNRGPAPPGHESSGPASPDNGVPPPPI
APSMSTILDRPS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagtggacgggctatagggggccggtctcccccaccctccccctgctc
ctcctccccctcctcctgtccttcttctcctccacgccccccctcgctcagggagccatc
agcatccccgaaaacttgtcggagcctccggagctgacagagctgccactctcgtacaca
gtcttttctcacgaagacatcaatctgccctgtgaggccaccggtaacccatctcccact
ttccgctgggtgaaagacggcgaggcgttcgggtcggtgcgtgaagagttcgggacgtta
agagcccaagatgaagaaaagacactcgactcgtacggaggctactaccgctgttacgcc
tcgaacactctgggaaccgccatgacacaatccgtacatctcatcgtggagcctcaaccg
gttcttctaaaacagcaacgggtcgataagaaagcaaacgagggagatagcgtgatcctg
gcctgcaaccctccaaacagctccacccccccgcacatccactggatggacaggaggatg
gtgcacatcaagctgaacgacagagtgatggtcggcctggacgggaacttgtacttttct
aatcttattaagacagacagcagaagggactactcctgcaacgctcagtacaccgcagcc
aggacggtcctccctctccctgctgtccacctcactgtcatacagagtaatgatcttgtt
catggcaagaagcctgacttcttccatcccgtgggctcccacagctccgtgcaggccctc
acgagccacagcgtcgtcctcgaatgtctccccaaaggcctgccgactccgaagatggag
tggaagaagaaggatggcagcctggaggaaaccagcggcagggtggattcagattcccac
ggccgctggtttcgcttcgacagcatcgagcagaatgatgacggggagtacgagtgcgtc
gcctccaacaaccatggctccgtctcacactccttcaccctcactgtggaagcccctccg
tactgggtgaagaagcctcagagtcagcgctatgctccgggggaaacggtgcgtctggac
tgtcaggctgaaggcatcccggccccaaagatcagctggagcatcaacggagagctgctc
tcagatgtggatgatgaccctcgtcgcagagtgtcggggggtgtgatgatcctgatagac
gtggtgtttacagacaccgctgtgtatcagtgtgtggcgtccaacgaacacggctccatc
ctgctcaacatatacctctatgttgttgagctgcctcctcagatcctgacctctgatgca
aaggtgtacaaattcaccgagggcggatccgtcgtgatggactgtgagtccttcggctcg
ccacgcccacacatcacatgggagggggacgacaggcttcctctgctgtcggaccctcgt
gtcgccctgctcaccaacggttccatcattgtgtccgacgtcagtcacgaggacagcgga
gagtacagctgctctatcaaatacagcaacatctccatctctgctcacctagaggtctac
aaccaaacggtgatcctgaacgggccgcaggacgtgcgtgtgctccgaggaagcagcgct
ctgctggactgtgtcttccagaaagaccctcgcctcataaagtaccagatcgtctggaag
aaggccgaacacaaaatgcaggaatcgtctccagatgacaagcacacgatatttgataat
ggaaccctgaaagtcaccaacatccaatcagatgacagcgctcgctattcctgtgaggtc
atcactgctctgggaagcgtaacagccagtggctccatcactgtcgtggcccggccggac
tctcctgaaggtctgtctctgtctgatgtcgccgaccacagcctcacactcagctggaac
ccaggaaaatcacacaacagccccatcatagagttcatcgtggaggctcgcgaggagcag
cacgcggagcacggcaggtggaggtgggaggagtggaagagggtgccgggggagttcaac
cacctggagctcaccctccacccgtactgcacctaccgcttcagggtcttcgccgtcaac
gagatcggccgcagcgaccccagccatttctcggaccaccacaaaaccccccctgccgtc
cctgacagaaacccctcaggtgtgcgcagcgagtccacagaccctaagactatgatcatc
acctgggacgagatggacaagcgcttccactccggcgaggggttcaagtaccacgtgtcg
tggcgtggggggggcgacgctcagtggaaccacgcagacgtcgctacgcctccgtacgtc
atcaacgacacggggacgtacacgccgtttgagatcaaagtccaggctgtcaacgacgtg
gggggggcaccgacgccggagccggagatcggatactccggagaggacgagccgcaggaa
gctcccactaatgtctccaccaaagtgatggacagcaccgtcacagtcaagtggaaagaa
gcccaaaatgtgagaggtctgctgctgggatacaagatctacctccagaggttgggtccg
cagggcagtcgggtccggaggtctctcgggaaacagcaccagaagagagaggataagcta
gggcgagcgagggagagagaccgggaggtggtggtccacggcgtgaagacctcagaggag
gtgacggggctgcggctttactccagctacgaactgtccgtcgctgcctttaacagcaaa
ggggaggggcctcgctcccccccgcaccacttcagcaccccacagggagcgcctggtcct
cctgcatcgttaaggttggagagtccttcagagaagtccatgctcctctactggagccct
ccagaagaaaccaacggcatcctgcagggatacgtggtgcagtatcgggaggatctggag
aacagcttgctgcagatggagtacatcgacgaccctaccgtgacccactttgagttggac
tctctggacccgagcagccattacatcttcaacgtgatcgctagcaccattgtagaagga
ccccccataacccggaggggggccaccgcgctggacggagttgctccatcacacatcaac
atagttcccagcaacacgtcactcaacctgagctgggtgcacggagagaggttcaggaac
cacggcttcatcattcgataccgcaggaagagccccggctgtgattggttggactcggag
gtggtgaactccacgcagggtttctattcgctgaaaggcctcctgccgggatctgagtac
caactcgtgatcaacgacactcagtgggagaactcgacacggaccataggagcagcgccg
tcggtgatgcccggtgggttcgctgctcggggttggttgatcggactcatcgctgccatc
ctgctgctggtgctcatcctgctcatcctctgcctcatcaagcgcagcaagggggggaaa
tacgcagtgaaagacaaagaggacaaggagggggactctgaggctcggcccatgaaagac
gagacgtttggagagtacagcgatgccgatgagaagcgctctgagagccagccctctctg
tgtggggagagtaagctgggcagcgacgactctctggcggagtacggggacagcgtggac
atccagttcaacgaggacgggtccttcatcggccagtacagcaaccgagggcccgccccc
cccgggcacgagagctccggccccgcctccccggacaacggcgtcccgcctccccccatc
gctccgtccatgtccaccatcctcgaccggcccagctag
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