Pseudochaenichthys georgianus (South Georgia icefish): 117449271
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Entry
117449271 CDS
T09629
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040
Spliceosome
pgeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117449271
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117449271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgeo03041
]
117449271
Spliceosome [BR:
pgeo03041
]
Common components
Common spliceosomal components
SR proteins
117449271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117449271
NCBI-ProteinID:
XP_033942727
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All DBs
Position
7:26406815..26411640
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AA seq
368 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIIENARGPRRDRDRDGDRDRDRDGHGGGYRGGGPSSGYSSRSHTGRDKYGPPVRT
EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRAIDKLDG
TDINGRKIHLVADRQRKRRSDPGSRSRSRSRRRSHSRSSKSRSRSGSRSNKRRGHSRSRS
GRKSRSKSGESKSRSRNRRSRSRKSKSRSNSRKSRSGSAERKSKSRSKSRSKVKSERGSR
SPSKEMSVDKKSRCRSASPLENGKDEHVAKSASRSPTPHEDDRRSKSKEKSSPSLSRSRS
RSRLASQD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttatatcgggagactgagctataatgtacgcgaaaaggacatccagaga
tttttcagcggatatggaaagctcatggaaattgatttaaaaaacggctatgggttcgtg
gagtttgaggataaccgggacgctgacgatgccgtgtatgagctgaacgggaaggagctg
tgcggcgagcgggtgatcatcgaaaacgcccggggaccacggcgagaccgggaccgggac
ggagaccgagaccgagaccgagacggccacggtgggggttacaggggtggtgggcccagt
agcggttacagcagccggagccacactggaagggataagtatggaccccctgtccgtact
gaataccgtctcattgtggagaatttgtccagccgctgcagttggcaagacctcaaggac
ttcatgcgtcaggcaggagaggtgacgtatgcagatgcccataaggaacgcacgaatgag
ggtgtaatcgagttccggtcccactcggacatgaaaagggccattgacaagctggacggt
acagacattaatgggcgcaagattcacctggtggcggaccggcagcgcaagcgcaggtct
gaccctggcagccgctccaggtctcgtagtcgccgtcgttcccacagcaggagctccaag
agtcgctcgaggtctggttcccgtagcaacaagagacgtggccactcccgctccaggtct
ggaaggaagtctcgctccaagtcgggagaaagcaaatcccgatctcgcaaccgcaggtcc
cgttctcgcaaatccaaatcacgttctaactcccgcaaatcccggtccggttctgctgag
cgaaaatccaaatctcgctcaaagagtcgttcaaaggtaaagtcggagcgaggttctcgc
agcccgtccaaggagatgtctgtggacaagaagtcccgctgtcgttccgcctccccactg
gagaacgggaaggatgagcatgttgccaaatctgcctcccgctccccaaccccacacgag
gacgaccgcagatccaagtccaaggagaagagctctccgtccctctcaaggtctcgctcc
cgttctagattggcttctcaggattag
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