Pseudochaenichthys georgianus (South Georgia icefish): 117449328
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Entry
117449328 CDS
T09629
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgeo03400
]
117449328 (apex2)
Enzymes [BR:
pgeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117449328 (apex2)
DNA repair and recombination proteins [BR:
pgeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117449328 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
117449328
NCBI-ProteinID:
XP_033942831
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Position
7:complement(6392710..6397161)
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AA seq
573 aa
AA seq
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MKIVTWNINGIRTFRGGIKKALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPCAAGEGLTGLLTHHEGAVGCYGDQSEFCSEELQLLDNEGRTV
ITQHRVMCQDKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVL
GDVNTSHRQIDHCDPSDIEDFVENPGRKWLNGFLHGGRKTEETNEEEPNEEPEVTSSDPV
HGGTFVDTFRHFHPTRTSAFTCWSTMTGARQTNYGTRIDYIFADCQLAKEQFVAVDIMPE
VEGSDHCPVWAKLSCSLLPSSKAPPFCTCYLPEFAGKQQKLSRFFVKVDQKSIQSEHREG
LPGSQEEEELRENLKPPGAGNASGKKRLLTSDSVVPKGKKAKTCPKPQGSLLSFFKPKLP
TAAPSTEAPEKKTLGTDKVTSSQNSQKACTTSKDTSSVTSSETVPELLDDASPKLCTSMQ
SDKPINLKPLIPAPDVGQSGAKKGASLGFWKSVLHGPPPPPSCKVHREPCVLRTVKKEGP
NMGKQFFVCARPQGHASNPDARCSFFAWVEKGK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaacggcataaggactttcagaggaggcattaaaaag
gctcttgattctctggacgcggatataatctgtgttcaagagacaaaagtgacaagagac
ttgcttgatgagaggactgccattgttgacggatacaactcttatttcagcttcagtcga
ggacgcagcggctattcaggggttgccacttactgtaaagacagtgccaccccatgtgct
gctggagagggtctcaccggtctgctgacccaccatgaaggagctgttggatgttatgga
gaccagtctgagttctgcagcgaggaactgcagcttctggacaatgaaggacgaaccgtt
atcacacagcacagagtcatgtgtcaggacaaagaacaaactgtaaccgtgatcaacgtg
tactgtccgcgggccgaccctgagaagccggagcgaaagcagttcaagcttcagttctac
aaactgcttcagagtcgggctgaagctatactgaaagatggcagccacgtgatcgtttta
ggagatgtaaacacgtctcaccggcaaatagaccactgtgaccccagcgatattgaggat
tttgttgaaaaccctgggaggaaatggctgaatggcttcttgcacggtggcagaaaaaca
gaggaaacgaatgaggaggaacccaacgaagaacctgaggtaacttcctcagatcccgtc
cacggtgggacatttgtggacacatttcgccacttccatccgactcgcaccagcgccttc
acgtgctggtccaccatgactggagcgcggcagaccaactacggcacgcgcattgactac
atcttcgccgactgccagctggccaaagagcagtttgtggcggtggacatcatgccggag
gtggaggggtcggaccactgccctgtgtgggcgaagctgagctgctccctcctgcccagc
tccaaggccccccccttctgcacatgctacctgccagagtttgcaggcaagcaacagaaa
ctgtcccgcttctttgttaaggtggaccagaaatcgattcagtccgagcacagggaggga
ttacctggatctcaggaagaggaggaattgagggagaatttaaagccacccggagctgga
aacgcctctggtaaaaaacggttattaacatcagactccgttgttccaaaggggaaaaag
gctaagacttgtccaaagccacagggcagcctcctctccttcttcaaacccaaacttcca
acggctgctccttctaccgaagcccctgaaaagaaaacactcggcacggacaaagtaacc
tcttcgcaaaactcccaaaaagcgtgcacgaccagcaaagacacatcctcagtcacaagc
agcgaaactgtccctgagctcctcgatgatgcttcaccaaagctctgcacctcaatgcaa
agtgacaaaccgattaatctaaaacctttaatcccagcgcccgacgtgggacagtccggt
gccaaaaaaggggcttcgttggggttctggaagtccgtgcttcatggtccgcctcccccg
ccctcctgtaaggtccatagggaaccctgtgtgctgcgtactgtgaagaaggaggggccg
aacatggggaaacagttctttgtttgcgcccgtcctcagggacacgcctccaaccccgac
gctcggtgtagtttctttgcgtgggtggagaaggggaagtaa
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