Pseudochaenichthys georgianus (South Georgia icefish): 117449351
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Entry
117449351 CDS
T09629
Symbol
lamb2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117449351 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117449351 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
Laminin_II
TPR_MLP1_2
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
117449351
NCBI-ProteinID:
XP_033942873
LinkDB
All DBs
Position
7:complement(37052594..37123758)
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AA seq
1797 aa
AA seq
DB search
MKASLLMLACVLAVAVGQEPDYSHGCAHGSCYPATGDLLVGREKSLKASSTCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRMENVITTFKPHRKKSWWQSENGKSDVIIQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGRTWQIYRYFSHDCASAFPGVSQGPLRN
INDVICESRYSDIEPSTEGEVIYRVLEPSIRIEDPYSPSIQSQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAMYELVVRGNCFCYGHASECARIEGIKADIEGMVHGRCVCNHNT
RGLNCEECDDFCNDLPWRPAEGRNTNACKKCNCNGHSSTCHFDMAMYQATGNVSGGVCDD
CLHNTMGRNCEMCKPFYYQDAFKDIRDPHVCVACDCDPDASQNGGMCDSHTEPSLGMVGG
QCRCKANVEGPRCDKCKTGYFGLSAKNPQGCQPCRCDPRGTVSGRSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWALSHDLKGCRGCECDIGGAHDNHCSMESGQCRCRSHMAGRQCTQVE
SRYFFMALDHFLYEAELAKMGQGCTLETREHQQGRPASWTGLGFARVPEGGTLEFLITDI
PYSMEYDLLIRYESQMPRDWEEVRITIVRPGPIPTSSPCGNTIPDDDRFLVSLPAGARFM
VPPRAVCLEQGVTYTLRFEFRRYQDANSVLNGAANALLLVDSLALMPRHSSMDMFTAGDV
ASNNRKHTFERYRCHERAKSVTRPMISDTCAKILTSMSAIINNGALPCNCDPQGSISAMC
DVRGGQCPCRPSVIGQRCDQCAPGTYGFGPSGCIACGCSLEGAVTRLCDKFTGQCQCRPG
AFGPRCDGCQSGHWGFPSCRLCQCNGHAEQCDQRTGACINCRDNTGGDKCDRCGNGYYGN
AILGKAANGQCRPCQCPEGPNSGRHFAASCYQDNHNRQIVCNCNQGYTGIVKRSGVSIYK
RARCDECAPGFYGNPSQPGGRCQPCQCNNNIDMSDXEACDRRTGECRKCLYNAEGPSCGI
CKSGYFGDASRRNCRKCTCNFLGTDRGSVWSREDCVCQRATGQCQLSANVIGLTCDHWRP
NHWNLANGKGCDACGCDANNSVTSSCNEFTGQCQCRDGFGGKTCTDCQENYWGDARTQCR
VCDCDWRGIESSQCNRVTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRIV
QDLAVRTKTLAGRAHEIQTTGLTGPYEKAFKDLEEKLKRAQEIVNARNATAAAVATLMEL
IEDLRAQIGETTDALNRLEGDLTVVQDSNSEASKELSALEREAKELNLTSQQLHRQLDTL
KNSNFLGAYDSVRISYNKSRDAERRANESTTTKPSTVSQSADTRRRTERLISAKKDDFNR
KNAANKRALGDLNTRAQGLDLKKINEKVCGAPGDVPCGESPCGGAGCRDDEGHRHCGGLN
CNGAVAVADNALERSKHAAKELNKAMGEVEGLFTKVADAKTKAEEAKEKAQAALDKATAT
KNKVERSNNDLRDLIKQIREFLTQEGADPDSIEAVANRVLELSIPASPLQIKHLADEIKE
RVRSLSNVDAILQQTQGDVRRAEQLLLDAKRARHSAEGVKTTAETVKQALAGAQTAQTSA
EKAIARAKADIGDTEARLVQIESETSNNEKDLTEAMDRLGTLGQEIAALKTKRANNSMAA
ARAEETATMARDKANEAKQILDGQLTDKYHEVQQRVGTKAKAVQEAKKKAERLRDEAKEL
LKDAQDKLQRLAELEKNYEENQRRLEGKARQLDGLEDKMKAILTDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtcactactaatgctcgcctgcgtcctggctgttgccgttggccaggagccc
gactacagccacggctgtgcccatggcagctgttacccggcaacaggagacttgctggtt
ggacgagagaagagcctgaaggcctcgtcgacatgtgggatgaggagaaaggagccttac
tgcattgtcagccatttgcaggatgagaagaagtgtttcgactgtgactccaggcggcca
tatgacccagtgtacaacaccatcaatcaccgcatggagaacgtcatcaccacctttaaa
cctcaccgcaagaagtcctggtggcagtccgagaatggaaagtctgatgtcattatccag
ctggatctggaagcagagtttcatttcactcacttgattatgacctttaagactttccgc
ccggctgccatgctgattgaacggtcgtcagattttggtcgcacctggcagatctaccgc
tacttttcccatgactgcgcctctgcattccccggagtctcccagggtcctctgcgcaac
attaatgatgtcatctgcgagtcccgctactctgacattgagccgtcaactgagggagag
gtaatctacagagtgttggagccttccatcaggattgaggatccatacagccctagcatc
cagagccagctaaagatcactaacttgagagtgaacttcaccaagcttcacacactggga
gacaacttgctagaccccagagctgaaatcaaagaaaagtattactatgccatgtacgag
cttgtggtacgtggaaactgcttctgctacggccacgcctccgagtgcgcccgcatcgaa
ggcatcaaggccgatatagaaggaatggttcacggcaggtgtgtgtgcaaccataacact
aggggtttgaactgtgaagagtgtgatgatttctgcaatgacctgccctggagaccagcc
gagggacgcaacaccaacgcctgcaagaagtgtaactgtaacggccactccagcacgtgc
cacttcgacatggccatgtatcaggccacgggaaatgtgagcggaggagtgtgtgacgac
tgtctgcacaacaccatgggacgcaactgtgagatgtgcaaacccttctactaccaagac
gctttcaaagatatcagggacccacacgtctgtgttgcctgtgactgcgacccggatgct
tctcagaatggagggatgtgcgacagccacacagagccctcccttggcatggtgggaggt
cagtgccgctgcaaggccaatgtggaggggccgcgctgcgacaagtgtaagaccggctac
ttcggcctgagcgctaaaaaccctcagggctgccaaccttgccgctgtgaccccagagga
acagtgtcaggtcgctcccagtgtgaccccgtcagtggagactgcttctgcaagcgtctc
gtcactggacgcagctgtgaccagtgtttgcctgaacactgggctctgagccacgacctg
aaaggctgccggggctgcgagtgtgacatcggaggagcccatgacaaccactgctccatg
gagagcggtcagtgtcgctgccgcagccacatggcaggacgccagtgtacgcaggtggag
tccagatacttcttcatggctctggatcacttcctgtatgaggctgagttggccaaaatg
ggacagggctgtacactggagaccagggagcaccagcagggccggcctgcatcatggacg
ggcttggggttcgctcgggtccctgaggggggcaccctggagttcctcatcactgacatc
ccctactccatggaatatgacctgctgatccgctacgagtcacagatgccccgggactgg
gaggaggtgcggataacgatagtccgtccggggcccattcccaccagcagcccctgtggg
aacaccatcccggacgatgacagattcctcgtctctctgccggctggagccaggttcatg
gtccctcctcgggctgtgtgtctggagcaaggtgtgacctacaccctgcgctttgagttc
agacgctatcaggatgctaacagcgtcctgaacggagcggcgaacgctctcctgcttgtg
gactctcttgcgttgatgccacgccattcctccatggacatgttcactgcgggagatgta
gcttcaaacaacaggaagcacacctttgagcgctaccgctgccacgagagggcgaagagc
gtgacccgccctatgatcagtgacacctgcgccaagatcctcaccagcatgtcggccatc
atcaataacggggctctgccctgtaattgcgaccctcaggggtcaatcagcgccatgtgt
gatgtccgtgggggccaatgtccctgcaggcccagtgtgattggtcaacgctgcgatcag
tgtgctccggggacttatggctttggaccctcaggctgcatcgcctgtggttgcagcttg
gaaggcgccgtgactcgtctttgtgacaagttcacgggtcagtgccagtgccgccccgga
gcgttcggtcctcgctgtgatggctgccagtcgggtcactggggcttccccagctgcaga
ctctgccagtgtaacggacacgcagaacagtgtgaccagaggaccggagcctgcatcaac
tgcagggacaacaccggaggagacaagtgtgacaggtgtggcaatggctactacggtaac
gcaattttgggcaaagcagccaatggtcagtgtcgcccgtgccagtgtccagagggcccc
aacagtggacgccactttgctgcatcttgttaccaggacaaccataacagacaaatcgtc
tgcaactgtaaccagggttacacagggattgttaaacgctccggggtcagcatttataag
cgagctcgctgtgacgaatgtgctccgggtttttacggcaacccctctcaacccggaggc
cgctgccagccgtgccagtgcaacaacaacatcgacatgtccgacnacgaggcctgcgac
cggcggaccggagagtgcaggaagtgcctctacaacgccgagggccccagctgtggcatc
tgcaagagcggctactttggggacgcttccaggcgcaactgcaggaagtgcacatgtaac
ttcctgggtaccgaccgcggcagtgtatggagccgcgaggactgtgtgtgccagcgtgcc
acagggcaatgccaattgtctgcgaacgtcatcggcctgacgtgtgaccactggcgcccc
aaccactggaacctggccaacgggaaggggtgtgacgcctgcggctgtgacgccaacaac
tctgtcacctcgtcgtgtaacgagttcactgggcagtgtcagtgtcgggatggctttggt
gggaagacgtgcacagactgtcaggagaactactggggagacgcgaggacgcagtgcaga
gtgtgtgactgtgactggcgaggcatcgagtcctctcagtgcaacagggtgacgggccac
tgcgtgtgccagcagggggtgtcgggggtccgctgtgaccagtgtgcccgaggcttctcc
ggacagttccccaactgtcagccctgtcaccagtgcttcggggactgggaccgcattgtg
caggacctagcagtgcgtacaaagactctggcagggcgtgcccatgagattcagaccacc
gggctcactggcccctacgagaaggctttcaaggacctggaggaaaaactgaaacgagct
caggagattgtcaacgcgcgcaacgccaccgcagcagccgtcgctacactgatggagctt
attgaagatcttagagcgcagatcggtgagaccactgacgccctgaaccgtctggaggga
gacctcacggtcgtgcaggacagcaactctgaggccagcaaggagttgagcgctctggag
agagaggctaaagagctgaacctcacctcccagcagctgcaccgccaactggacaccctg
aaaaactccaacttcctaggtgcgtacgacagcgtccgtatctcctacaacaagtctcgt
gatgcggagcgccgtgccaacgagtcaacgaccaccaagcccagcacggtcagccaatca
gcagacactcgccgccgcaccgagcgcctcatctccgccaagaaggacgacttcaaccgt
aaaaatgctgccaacaagcgcgcgcttggagatctcaacaccagagcacagggcctggac
ctcaagaagatcaatgagaaggtgtgcggcgccccaggtgacgttccctgtggtgaaagt
ccttgtgggggtgcaggttgccgtgacgatgaagggcaccgtcactgtggaggcctgaac
tgtaacggcgctgtggcagtcgcagacaacgccctggagagatcgaaacacgcagcgaag
gagctgaacaaagccatgggagaggtggagggactcttcaccaaggtggcagacgccaag
accaaggcagaggaggccaaagaaaaagcccaagcagctctagacaaagccacggccacc
aagaacaaagtggagcgctccaacaacgacctgagagacctcatcaagcagatcagagag
ttcctcactcaggagggtgcagacccagacagcattgaggccgtggccaaccgcgtgttg
gagctctccatccccgcctccccgctgcagatcaaacacctcgctgatgaaatcaaagaa
cgagtccgcagcctctccaacgtggacgccatcctgcagcagacgcagggcgacgtccgc
agagcggagcagctgctgctggacgccaagagggccaggcacagtgcagagggagtgaag
acgacagcggagacagtgaagcaggcgctggccggcgctcagacggctcagacgtccgca
gagaaggccatcgccagagccaaggctgacatcggggacactgaagcccgcctggtgcag
atcgagtcagagacctccaacaatgagaaggacctgacggaggccatggaccggctggga
accctggggcaggagatcgctgccctgaagaccaaacgggccaacaacagcatggcagca
gcccgagcagaggagaccgccaccatggcacgagacaaagcaaacgaggccaagcagatt
ctagacggccagctgacagataaataccatgaggtgcagcagcgggtcggcacaaaggcc
aaggctgtgcaggaagcaaagaagaaggcagagaggctcagagatgaggcaaaggagctc
ctgaaagacgcccaggacaagctccagaggctagcagagcttgagaaaaactacgaggag
aaccagaggaggctggaggggaaagctcgtcagctggatggcctggaggacaagatgaaa
gctatcctcactgacatcaacaaacaaatccagatctacaacacatgccagtaa
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integrated database retrieval system
