KEGG   Pseudochaenichthys georgianus (South Georgia icefish): 117449370
Entry
117449370         CDS       T09629                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pgeo  Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117449370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgeo03019]
    117449370
   03041 Spliceosome [BR:pgeo03041]
    117449370
Messenger RNA biogenesis [BR:pgeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117449370
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117449370
Spliceosome [BR:pgeo03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    117449370
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 117449370
NCBI-ProteinID: XP_033942907
LinkDB
Position
7:complement(19269800..19273742)
AA seq 410 aa
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVDEVDAAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFSQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TRQEMQTAGMGRSSSSGGGGGGRPYDYDRGFSPSGRGRYGDGPYNSNGGGGANDGGGGGG
GSGGGYGGGPGGYNNGGNRGYNQGGYNQGGGGGGGGGSGGGGGGSYGGNGYESNGYGNCG
GGGGGSSGGGGGGGNNYNNMGNYDAQASNFGPMKNNFGGGGGGSVGGGGGGGGGGRRRRR
KEQLWRWLWRWLKQRWWIWSFGTILNVKWKLNMVSKTRFHFCDNGSIQAS
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgtcgaaagatgtaccacgcgagccagagcagcttcgcaagctgttcattggaggtctg
agcttcgagactacagatgaaagcctgagggctcattttgagcaatgggggagccttaca
gactgtgtggtcatgagggaccccaattccaaaaggtccaggggctttggctttgttaca
tactcctccgttgatgaggttgatgctgcaatgactgcccgcccccacaaggtcgatgga
agagtggttgaacccaaacgggctgtttccagagaggactcaaaccgaccaggagcccat
gtgaccgtaaaaaagatatttgttggtggcatcaaagaagacacagaggagtcccacctg
agagattacttttctcaatttggcaaaatcgaggtcattgatatcatgaccgaccgtaac
tctggaaagaagaggggctttgcctttgtgacgtttgatgatcatgattcagtcgacagg
attgttatccaaaaataccacactatcaactctcacaactgtgaagtgaggaaggctctc
acgaggcaagagatgcagacagcaggaatgggtcgcagcagcagcagtggaggaggcgga
ggtggaaggccctatgactatgacagaggcttcagcccgagtggtaggggtcgctatggt
gatggtccttacaattccaacggtggtggtggtgccaacgatggtggtggtggcggcggc
ggcagtgggggtggatatggaggtgggccaggcggatacaacaatggtggaaaccgaggg
tataaccaaggaggttacaaccagggtggtggtggaggaggaggaggaggaagtggtggt
ggaggaggcggtagctatggaggaaatggttatgagagcaatggctatggtaactgtggt
ggtggtggcggtggtagtagcggaggtggaggtggtggtggaaataattacaacaatatg
ggcaactacgacgcccaggcctccaactttggcccaatgaaaaacaactttggtggcggt
ggtggcggcagtgttggaggaggaggaggaggaggagggggggggaggaggaggaggagg
aaggagcagctttggcggtggctatggaggtggctcaaacaacggtggtggatatggtcg
ttcggcacgattctgaatgtgaagtggaaactcaacatggtgtccaaaacccgattccat
ttctgtgacaatggctcaattcaggcttcatga

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