Pseudochaenichthys georgianus (South Georgia icefish): 117449373
Help
Entry
117449373 CDS
T09629
Symbol
hoxc11a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117449373 (hoxc11a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117449373 (hoxc11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
117449373
NCBI-ProteinID:
XP_033942914
LinkDB
All DBs
Position
7:complement(19416017..19418409)
Genome browser
AA seq
364 aa
AA seq
DB search
MTISTFDHVSAGRLRRIARHLAFPNFPLLLQLVSKTSIYSTEYXRERKMFNSVNLGNFCS
QTRKDRTSEFGDRTGCASNIYLPSCTYYVPEFSAVSSFLPQAPSRQISYPYSTNLSQVQP
VREVSYGLDPASKWHHRSNYASCYSGEDLVHRDCLPPSTMTEMLMKNESVYSHHHHHHTH
PGSNHPSTGFYSGVGKNSVLPQGFDRFFETAYCSSTDNQSDNCLQKGEGGKLESDSQQQQ
EQPIASVAGAPEQEKDPDDEEEHTNSGSCRSSSATTKDGTANKSSHSSTPRTRKKRCPYS
KFQIRELEREFFFNVYINKEKRLQLSRMLNLSDRQVKIWFQNRRMKEKKLSRDRLQYFSG
NPLL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatctactttcgatcacgtgtctgcggggcgacttagacggattgcgcgtcat
ctcgccttcccaaatttcccccttctgctgcagctcgtatccaaaacatctatctatagt
acggagtacnngagagagagaaagatgtttaactcggtgaatctgggcaacttctgctcc
cagacgcgcaaagaccggacatccgagtttggggacaggacgggctgcgcgtccaacatc
tacctccccagctgcacctactacgtcccggagttttcagccgtctcctcgtttcttccc
caggccccgtcccggcaaatcagctacccttattctacaaatctgtctcaagtgcagccg
gttcgggaagtttcatatggcttggaccctgctagtaaatggcaccacagaagcaattat
gcatcgtgctactcgggagaggatctggtgcatagggattgtctcccaccatccaccatg
acagaaatgcttatgaagaacgagagtgtgtacagccaccaccatcaccatcacacccat
ccgggttccaatcacccctccacgggtttttactccggcgtggggaaaaacagcgtcctc
ccgcaaggtttcgaccgcttttttgagaccgcatactgcagcagcacggacaatcagtca
gacaattgtttacaaaagggcgagggggggaagcttgaaagcgactcccagcagcagcag
gagcagcccatagcctctgtagccggagccccggagcaggaaaaggacccagacgatgag
gaggaacatacaaattcaggctcatgcaggtcttcctccgcaacaaccaaggacggcacc
gccaacaagagcagccactcgagcactcctcgcacaaggaagaagaggtgtccctattct
aaatttcagattcgcgagctggagcgggaattcttctttaacgtttacatcaacaaagag
aaaaggcttcagctttcccgaatgctaaacctctccgaccgtcaggttaaaatttggttt
cagaatagaagaatgaaagaaaagaagctgagcagagatcgcctccagtacttctctgga
aaccccctattgtga
DBGET
integrated database retrieval system
