Pseudochaenichthys georgianus (South Georgia icefish): 117449386
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Entry
117449386 CDS
T09629
Symbol
hoxc5a
Name
(RefSeq) homeobox protein Hox-C5a
KO
K09305
homeobox protein HoxA/B/C5
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117449386 (hoxc5a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117449386 (hoxc5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
NOD
DUF2209
SEEEED
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117449386
NCBI-ProteinID:
XP_033942934
LinkDB
All DBs
Position
7:complement(19372853..19375940)
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AA seq
228 aa
AA seq
DB search
MSSYVDSCNLRQTSETTSPNTMFSFDLSGRPSSHYEGVNVNGIFTCPVPTTSVEREEMKT
SLRGITDTPLPSGPQITMVSSSSSMDSSGLNYGSSTLLGRGVDRDPERSAKSVGNKNHDS
ERNAENTQTVKRHTNVNQRQDSEQRPQIYPWMTKLHMSHESEGKRSRTSYTRYQTLELEK
EFHFNRYLSRRRRVEIAHTLCLNERQIKIWFQNRRMKWKKDSKIKVKE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttatgttgacagctgcaatctcaggcaaacaagcgagacaacttctcctaac
actatgtttagtttcgatctttccgggcgcccgtccagccactatgaaggtgttaatgtg
aacgggatattcacttgtcccgtccccacgacctctgttgaacgggaggagatgaaaact
agcctgcgtggcattacggatactcctctcccgtcaggaccacagataaccatggtctcc
agcagctcgtccatggactcaagcgggctgaactacggcagcagcactctgcttggacga
ggggtggacagagacccagaaaggagcgcaaaatccgtcggcaacaagaaccacgacagc
gagagaaacgcggagaacacgcaaacggtgaaacgacacacaaatgtgaaccagcgtcag
gacagtgagcagcggccacagatttatccatggatgacaaaactgcacatgagccacgaa
tcggagggtaaacgctccaggaccagttacacccgctaccagactctggagctggagaaa
gagtttcacttcaaccggtacctgagccgccgcaggcgcgtagagatcgcccacaccctg
tgtctaaacgagaggcagatcaaaatctggttccagaacagacgtatgaagtggaagaag
gactcaaagatcaaagtgaaggagtaa
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