Pseudochaenichthys georgianus (South Georgia icefish): 117449389
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Entry
117449389 CDS
T09629
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04310
Wnt signaling pathway
pgeo04520
Adherens junction
pgeo04916
Melanogenesis
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117449389 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117449389 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
117449389 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117449389 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117449389 (lef1)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
117449389 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117449389
NCBI-ProteinID:
XP_033942953
LinkDB
All DBs
Position
1:39704014..39810740
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AA seq
440 aa
AA seq
DB search
MAASARAIISTSRKLLRMTSRWNRQRGRDFASRLTWQLSGGSGDPELCATDEMIAFKDEG
DPHKEQIFAELSHSEEEGDLADIKSSLVNESESSPNSNSHDGMRQSQMSQDSYHEKHRDH
MEEAKLQDLYNKGHQYQGYPGYSIMMSSMNDNYMSNGSISPPMARTSNKVPVVQPSHAVH
PLTPLITYSDEHFAPGPHSGPHPQDMNKQGMQRHHQDMSNFYSLSPGGVGQITPPLGWFS
HHMVPGPQGPHATGIPHPAIVNHQVKHEPPHETDIMHMKPQHEQRKEQEPKRPHIKKPLN
AFMLYMKEMRANVVAECTLKESAAINQILGRRWHALTREEQAKYYELARKERQLHMQLYP
GWSARDNYGKKKKRKREKMQESAPDAVFCRYRPENENGVHLRIWRETEQFLHMQSEGSSY
GPSARDGGLLEFHEDPKYPN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaagcgcgagggctataatttctacttcaaggaagttgttacgaatgactagc
aggtggaatagacagcgggggagggatttcgccagcagactcacctggcagttatcaggc
ggcagcggagacccggagctgtgcgccacggacgagatgatcgcgttcaaagacgaagga
gacccgcacaaggagcagatcttcgccgagctcagccactcagaggaggagggagacctg
gcagacatcaagtcatctctggtcaacgagtcagagagcagccccaacagcaacagccac
gatggaatgagacagtcccaaatgtcgcaagattcatatcacgaaaaacacagagaccac
atggaagaagcaaaactccaagacctgtacaataagggccatcagtaccagggctacccg
ggctacagtatcatgatgagcagcatgaacgacaactacatgagcaatggctccatctcg
ccgcccatggccagaacgtccaacaaagtccctgtggtgcagccgtcccatgcagtccac
ccactcaccccgctgatcacgtacagcgacgagcacttcgcaccaggaccccactctggt
ccccacccccaggatatgaacaaacaaggaatgcagaggcatcaccaagacatgtccaac
ttctactccctgtctcctggaggagtcgggcagatcacgccaccgctgggatggttctca
caccacatggttcctggcccccaaggtccccacgccacagggatcccccacccggccatc
gtcaaccatcaggtcaaacacgagcctccgcatgaaacagacatcatgcacatgaagccc
cagcacgaacagagaaaggagcaggagcccaaaagaccgcacatcaagaagccgctaaac
gctttcatgctttacatgaaagaaatgcgtgcgaatgtggtggcagagtgcacgctgaag
gagagcgcggccatcaaccagatcctgggccgaaggtggcatgcattaactcgggaagag
caagctaagtattatgagttagcgcgcaaggaacggcagctccacatgcagctctaccca
ggctggtccgctcgagacaactatggaaagaagaagaagcggaagagggaaaagatgcag
gagtcagccccagatgcggttttctgcaggtacaggccagagaatgaaaacggcgtacat
ctgagaatatggagggaaacggaacaatttctccacatgcaaagcgaaggcagcagctac
gggccctctgctcgagatggaggcctgttagagttccatgaagaccctaaatatccaaac
tga
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