Pseudochaenichthys georgianus (South Georgia icefish): 117449496
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Entry
117449496 CDS
T09629
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04145
Phagosome
pgeo04210
Apoptosis
pgeo04517
IgSF CAM signaling
pgeo04530
Tight junction
pgeo04540
Gap junction
pgeo04814
Motor proteins
pgeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117449496
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117449496
09143 Cell growth and death
04210 Apoptosis
117449496
09144 Cellular community - eukaryotes
04530 Tight junction
117449496
04540 Gap junction
117449496
09142 Cell motility
04814 Motor proteins
117449496
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117449496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117449496
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117449496
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117449496
04147 Exosome [BR:
pgeo04147
]
117449496
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117449496
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117449496
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117449496
Exosome [BR:
pgeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117449496
Exosomal proteins of other body fluids (saliva and urine)
117449496
Exosomal proteins of colorectal cancer cells
117449496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
117449496
NCBI-ProteinID:
XP_033943104
LinkDB
All DBs
Position
7:complement(4771358..4774812)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDTVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGDGEEEGEEF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgtcggtcaggctggagtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
acgtgtggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcatcgatgaggtgcgcact
gggatctaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggcaaggagatcattgacacagtgctggac
aggatccgcaaactggctgaccagtgcaccggtcttcagggtttcctggtgttccacagc
ttcggcgggggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggttgataacgaggctatttatgatatctgccgtaggaacctcgatatcgag
cgtccctcttacaccaacctgaacaggttgatcagtcagattgtgtcctccatcactgcc
tcccttcgctttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttccctctggccacctatgcccctgttatctctgcagagaaa
gcgtaccacgagcagctctcagtggcagaaatcactaattcctgcttcgagccagccaat
cagttggtgaaatgcgacccacgccacggtaaatacatggcctgctgccttttgtatcgt
ggtgatgtcgttcccaaagacgtgaacgctgccattgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggccgctctggagaaagattacgaggaggttggagtcgactccatt
gagggtgatggagaggaagagggagaagaattttaa
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