Pseudochaenichthys georgianus (South Georgia icefish): 117449500
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Entry
117449500 CDS
T09629
Symbol
cacna2d3a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3 isoform X2
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04010
MAPK signaling pathway
pgeo04260
Cardiac muscle contraction
pgeo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117449500 (cacna2d3a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117449500 (cacna2d3a)
04261 Adrenergic signaling in cardiomyocytes
117449500 (cacna2d3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117449500 (cacna2d3a)
Ion channels [BR:
pgeo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117449500 (cacna2d3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
CobT_C
BNR_assoc_N
Motif
Other DBs
NCBI-GeneID:
117449500
NCBI-ProteinID:
XP_033943109
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Position
7:17463467..17604379
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AA seq
1087 aa
AA seq
DB search
MQVDRSCVVSSAWCACLILLFSTLGTRVSEVGGTHQSIPPSVVKLWASAFGGEIKSISAK
YSGSQLLQKKYKEFERAVRVDEIDGLRLVKRLADNMEEMFHKKAEAMKRLVEAAEEAHLQ
HEEDPDLQYEYFNAVLINEVDEEGNSVELGGEFLLQPNDHFNNLSVNLSLSTVQVPTNMY
NKDSAIVNGVFWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIAF
DCRNRKWYIQAATSPKNVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNE
ELHYVESCLNGTLVQADVPNKDHFREHLQKLFAKGIGMLDIALTEAFNLLGDFNETGRGS
ECSQAIMLVTDGAVDTYDAIFAKYNWPDRKVRIFPYLIGRESAFADNLKWMACANKGYFT
QISTLADVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDNNMDDGKGPVLMTTVAMPVFS
TKNETRNRGILLGVVGTDVPVSELLKTVPKYKLGIHGYAFAITNNGYILTHPDLRPLYGD
GKKRKRKPNYSSVDLFEVEWEDKEDTLRNAMVNRKTGTFSMEVKKSVDKGKRVLVLHNDY
YYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLHDLEHPDVALADEWTYCNTDEHPEH
RYLSQIEAIKLYLSGHEPHLRCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSENSDKGVE
IAYLGSRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYS
LPFNSGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFWTASRQCAALDGKC
SISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQMGSFKRVTLYDYQA
LCWAFSESSDSGHTLLDPYFAFFSAVKWILTELVIFLVEFNLYSWWHSDLTAKAQRIGRS
MQVPCDTEYPAFISERTIKENTGNVDCGGCIKSFVIQQIPSSNLFMVVVDNKCDCSMFEP
ITMDPIEILYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAVGLTPSLAATLLCV
LLALFPR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatcggagctgtgtggtttccagtgcgtggtgtgcgtgtctgattttactt
ttttcaactctgggtaccagggtcagtgaggtgggaggcacccaccaaagcatccctccg
tccgtggtgaagctgtgggcttcagcttttggtggggagataaagtccatctcagcaaag
tactccggctcccagctgctgcagaagaaatacaaggagtttgagcgggccgtgcgggtg
gacgagattgatgggctgcggctggtgaagaggctggcagacaacatggaggagatgttt
cacaagaaagccgaggcaatgaagagactggtagaggcagcagaggaagcccacctacag
catgaagaggatccagacctgcagtatgaatacttcaatgcggtgttgatcaatgaagtt
gacgaggaggggaacagcgttgagcttggaggagaattcctcctgcagcccaatgaccac
tttaacaacctgtcagtcaacctgagtctcagcacggtccaggtgcccaccaacatgtac
aacaaagactctgcaatcgttaacggggtgttctggtccgaggccttgaataaagtgttt
gttgataactttgagagagacccatcactcatctggcagtactttggcagtgccaaaggc
tttttcaggcagtacccagggatcaagtggaagccggatgaacacggggtgatagctttt
gactgtcgaaaccggaagtggtacatccaggctgccacctctccaaagaatgttgttatc
ctggtggatgtcagtggcagcatgaaaggactccggctgaccatcgccaggcagacggtg
tcctccatactggacactcttggagacgacgacttttttaacatcattgcttacaatgag
gaattgcattatgtggagtcgtgcctaaatggaacattggtccaagcagatgtccccaac
aaagatcatttccgggaacacctccaaaagctgttcgcaaaaggcattggtatgttagac
atagccctgactgaggccttcaatctccttggtgacttcaatgagactggaaggggaagt
gagtgtagccaggccattatgttggtgacagatggggcagtggacacatatgatgccatc
tttgccaagtacaactggccagacagaaaggtccgcatattcccatacctgattggtcga
gagtcagctttcgcagataatctgaaatggatggcctgtgctaacaaaggctacttcact
cagatttcaacattggcagatgtgcaagagaatgtgatggagtatctccatgtgctgagt
cgtccaaaggtgatcgaccgggagcacgatacggtgtggactgaggcttacatcgacaac
aatatggacgatggtaaaggtccggttctgatgaccacagtggcaatgccagtgttcagt
accaagaatgagactagaaaccgaggcatcttgctgggggtggttgggacggacgtgcct
gtgtctgagctgctcaagaccgtccccaaatacaagctgggcatccatggctacgccttt
gcaatcaccaacaacggctacatcctcacacacccagatctacggccactttatggagat
ggcaagaagcgaaagcgaaagccaaactacagcagtgtggatctgttcgaggtggaatgg
gaggataaggaggacacgctgagaaatgccatggtcaacaggaagacagggaccttctcc
atggaggtgaagaagagtgttgacaaagggaaacgtgtgctggtgttgcataatgattac
tattacacagacatcaaagggactcctttcagtctgggggtagccctatccagaggccat
ggaaagtttttcttcagagggaatgtcacagtggaggaaggacttcatgacttggagcat
cctgatgtagcgctggcagatgaatggacatactgcaatacagacgagcacccagagcac
cgatacctgtcccagatagaggcaatcaaactctacctcagtggacatgaaccccaccta
cgatgtgacaaggagctgatccaggaggttctgtttgacgctgtggtcacggcccctttg
gaggcctactggacgagcctcgtgctcaacaagtcggagaactcagataaaggtgtagag
attgcctacctgggctcgagaacaggcctgtcgaggatcaacctgtttgttgtgcctgac
gagctcacaaaccaagacttcctgacagctgaagacaaagagggggtgttcaacgccgat
cactttcccctgtggtacaagagggcagcagaacaagttcctgggaccttcgtctactcg
ctacccttcaactcaggatcagaaaacaagagtgtggtattggccagcaccgccattcag
cttctggatgagaggaaatcacccatagctgcggctgttggcatccaaatgaaactggag
ttctttcagaagaagttctggacagccagcagacagtgtgcagcattagatgggaaatgc
tccataagctgtgatgatgagaacattaactgctacctcattgacaacaacggctttgtt
ttggtggcagaggactacactctgacagggaaattctttggagaagcagagggggctgta
atgagtaagctcctgcagatgggctctttcaaaagggtgactctgtatgactaccaggct
ctatgttgggctttctcagagagcagtgacagtggacacacactgttagatccgtacttt
gctttcttctcagctgtaaagtggatcctaactgagcttgtcatattcctggtggagttt
aacttgtacagctggtggcactctgacctcacagctaaagctcagaggataggccggagc
atgcaggtaccatgtgacacagagtacccggccttcatctcagagagaaccatcaaagag
aacacagggaacgttgactgtggcggctgcatcaagtcctttgtgatccagcagatcccc
agcagcaatctcttcatggtggtggtggacaacaagtgtgactgcagcatgttcgagcca
atcaccatggaccccatcgaaatcctgtataatgaatctctcaagtgcgagaggttgaag
atgcaaaaggacaggaggcgccctgatacctgtcacccttttcacccagaggagaactca
atggagtgtggaggagctgtggggctcaccccgtcgctcgcggcaacactgctctgcgtc
ctcctggcgctgttccctaggtga
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