Pseudochaenichthys georgianus (South Georgia icefish): 117449508
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Entry
117449508 CDS
T09629
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38 isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117449508 (arhgef38)
Membrane trafficking [BR:
pgeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117449508 (arhgef38)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
SHE3
SH3_3
Motif
Other DBs
NCBI-GeneID:
117449508
NCBI-ProteinID:
XP_033943123
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All DBs
Position
1:complement(40293086..40310358)
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AA seq
822 aa
AA seq
DB search
MDPNEAGGGEKEKDKDKEKVIKRRNRPVFLRYLERRRTDTIVAEDSAKGDFNLGTLVRRS
QSDKTEYSTKLKEKMTPHDLSTPPSPALDPEEVRLRKMSRRAKVIQELVQTEKDYLTDLE
LCIREVVQPLRNMQVVDVDRLFTNTETVCEVSAALLHRLHKAIADPDPEAVVIGEIFIQA
KAALEDVYKIYCYHHDDANMSLKSYEENEDIKKHFTACVLALKKIYDLEGKPNLLNMGSL
LIKPVQRIMKYPLLLGELWHATPQDHPDHQPLQEAYTAAKIINVNINEFKRRKDIVMKYK
RSDDEGTLRGKLNKFNIHSIRKKSDRFAGYLKILTGVEPQVRDEVFDREEKLFRSLEKAV
RQLAKNVQFYLLHIQEMVSVAVQKVQDMEDMIKDPNKNDINGSLHHNGNDPYKHFKDSME
RSVLAPLSSLQGMFTAPQKLIQKRYDKLLDYCSRLERSSSFSSSSSSSPTSSSTSLASED
PPGPAKRDYEAINALLVEELERFNKAAYHILTNCVLHIVTLLRGLMDQILLRAPSIQQLP
APLSNITEVQNSIMDELNNLTFVNDNAQKLMERKVSFERQRDKKITVPEVQHQTEEQRGW
LLAEYPTSHLYLLKRKCNGCQEQDLSLLEGELVALLEDTDPLGSSSRWLVHTGGSQGYVY
STFLKQYNPLRDSQRKSKMAREQQQQQQPAAMVDEDFDDISLFVSGGSSSSLRSFNLNTT
DSGSLRSFNLNTTDSGSTLSGLQGESESPEDLEDSSDAEAQQFYAVYAFQARCDQELTLQ
EYQHVRILKFSDLGGNKDWWLAEANGQKGYVPANYLGRMSYA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacgaggccggcgggggtgagaaggagaaggacaaagataaggagaaagtg
ataaagaggaggaaccggcctgtgttcctgcggtacctggagaggaggaggacggacact
attgtggccgaggattcggccaaaggtgacttcaacctggggacgctggtgaggaggagc
cagtctgacaagacggagtacagcactaaactaaaagagaaaatgacaccccacgacctg
tcgacgcccccctctccagctctggacccggaggaggtgcgtttgaggaagatgagccgc
agggcgaaggtcattcaggagctggtgcagactgagaaggactacctcacagacctggag
ctgtgcatcagagaggtggtccagcctctacgcaacatgcaggttgtggatgtagaccgg
ctgttcaccaacacagagacggtgtgtgaagtatctgcagctcttcttcacagactgcat
aaggccatcgctgaccctgatcccgaggcggtcgtcataggggaaatattcatccaggca
aaggcagcgttagaagatgtatataagatttactgttaccatcatgatgatgctaacatg
tccctcaaatcctatgaagaaaatgaagacattaagaaacatttcaccgcatgtgtatta
gctctgaagaaaatctacgacctagaagggaaacccaacctgctgaacatgggttcactg
ctcatcaagccggtgcagaggatcatgaagtaccctctgctgctcggggagctgtggcac
gccacgcctcaggaccacccggaccatcagccattgcaggaagcctacaccgctgctaag
atcatcaacgtgaacataaatgagttcaagaggcgcaaagatatcgttatgaagtataag
aggtcggatgatgaaggcacactgagggggaaactgaacaagttcaacatccactcgatc
cggaagaaaagcgacaggtttgcaggctatctcaagatcctcactggagtagagccacag
gtgagagatgaagtatttgaccgagaggagaagctgttcaggagtctggagaaggctgtg
aggcagctggccaagaatgtccaattttacctgctgcacattcaggagatggtatctgtt
gctgttcagaaagtccaggacatggaggacatgattaaggatccaaacaaaaatgacata
aacggctcattgcaccataatggaaatgacccttataagcactttaaagacagtatggag
cgctcggtcctcgcccccctctcctccctgcagggcatgttcacagccccacagaagctc
atccagaagcgctatgacaaattactggattactgcagccgcctggagcgctcgtcctcc
ttttcatcctcatcctcgtcgtcccctacttcttcctctacttcgctggcgtcagaagac
ccgcccggtcccgccaaaagggactatgaagccatcaatgctctgctagtggaggagttg
gagaggttcaacaaggcagcctatcacatcctgaccaactgtgtgctgcacatcgtgacc
ctgctcagagggctgatggatcaaatactacttcgtgccccgtccatacagcagctaccg
gcgccattgtcaaacattactgaggttcagaacagcatcatggatgagctgaacaatctg
acttttgtcaatgataacgctcagaagttgatggagcgaaaagtcagctttgagaggcaa
cgagacaagaaaataacggtgccggaggtgcagcatcaaaccgaggaacagcgaggctgg
ctgctggcagaatatccaacgagccatctgtacctgctgaagaggaagtgtaatggctgc
caggagcaggacctcagcctgctggagggggagctggtggccctgctggaggacacggac
cctctgggcagcagcagccgctggctggttcacactggaggttcacagggctacgtgtac
tccaccttcctgaagcagtacaaccctctgagggattcccagaggaaaagcaagatggcc
agagagcagcagcagcagcagcagccggcggccatggtggacgaggactttgacgacatc
agcctcttcgtgtcgggcggcagcagcagcagcctgcgcagcttcaacctgaacaccacc
gacagcggcagcctgcgcagcttcaacctgaacaccaccgacagcggctccaccctctcc
gggttacagggggagtcagagagtcccgaggacctggaggacagctcggacgcagaggct
cagcagttctatgctgtgtatgcgtttcaggcgcgctgtgaccaggagctgaccctgcag
gagtaccagcacgtccgcatcctgaagttctcggacctgggaggcaataaggactggtgg
ttagctgaggctaacggacagaaaggatacgtccctgctaactaccttggcaggatgtcc
tatgcataa
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