Pseudochaenichthys georgianus (South Georgia icefish): 117449544
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Entry
117449544 CDS
T09629
Symbol
lima1a
Name
(RefSeq) LIM domain and actin-binding protein 1a
KO
K23026
LIM domain and actin-binding protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pgeo04812
]
117449544 (lima1a)
Cytoskeleton proteins [BR:
pgeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117449544 (lima1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
117449544
NCBI-ProteinID:
XP_033943182
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All DBs
Position
7:complement(7124752..7148564)
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AA seq
708 aa
AA seq
DB search
MASTAPFSRRSWESQSLRVTAKELSIISARGKKNAIAERFSKYQIAAEEGNSEKKKAVTE
PLPFTLRSGNLSLLKKRWEQQHQQSSSLRAQPQACNPQTLKPAPTSHIQNHAETLKTAPP
SQDQDIDPETQLHCESSSHQLLSALPEDLIMEEKPSRESEEHQGVPAEVPECEKPSVPLN
SLKMMFEKGENLSDKGSREQPRRGSLGNTANMDQLLGDGSLAESTPLRDRMALYQAAISK
QEVTPSSVSGDQQDSFCGKQKENVPPCSLDLSLECEANGRKGFTSESNGSTNGTPVSSNQ
KDSAQPKTPKNFRLPVRETCVTCLKTVYPLERLVANQHVYHSSCFRCSHCSTKLSLLNYA
SLHNNVYCKPHFSQLFKAKGNYDEGFGHRPHKELWESKVESAETSPQPKAKTLSPEEEEE
EERPSVEDSPLAKVNVLTATMEALGQGAGEKSDRPPEARRLKISWPPRTELEESSGRSGA
ATEEGSPGKSVKAKWPPEEDSVPEQPKEAPCLRRTSSLKERSMPFTLAGQTQEVRKMSPP
PPLGDDRDLSPEPASMELHDGGHPPAEEVLISSGGEEEEEEEAENMPEQNLTREEEDTPD
EEPEEEEEKMEEEEEDVMEEEEEEMPPQKREQMISSPEGEVEASRSSQDVGFWDNEEAED
KEAEDKEAEDKEAEDKEEVQQEEEEGLTVEDMIKRNRYYEEEEEAEDV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccgctccgttcagccgcagatcgtgggagtcccagtcgctgagggtcacc
gccaaggagctgtccatcatctccgcccgggggaaaaagaacgccatcgcagaacgcttc
tcaaagtaccagatagcagcagaggagggaaattcagagaagaagaaagcggtcacagaa
cctcttcccttcacactgcgcagcgggaatctcagtcttttaaagaaacgctgggaacaa
caacatcagcagtcatccagcctcagagcccaacctcaggcctgcaaccctcagaccctc
aaacctgcgcccacatcacacatccagaaccacgcagagaccctgaagaccgccccaccc
tctcaggaccaggacatcgacccggagacgcagcttcactgtgagtccagctcccaccag
ctgctgtcggctcttcctgaggatctgatcatggaggagaagcccagcagagagtcggag
gagcatcagggagtgccggctgaagtacccgaatgtgagaagcccagcgttcccctcaac
agcctcaagatgatgtttgagaagggagagaacctgagcgacaaggggtccagagagcag
ccgagaagaggaagcctcggtaacaccgccaacatggaccagctactaggagatggaagt
cttgccgagtccacgcctctccgggacaggatggctctttatcaggcggccatctccaaa
caggaagtcacgccctcctccgtcagtggcgatcagcaggacagtttctgtggaaagcag
aaggagaacgttcctccgtgctctctggacttgagtttagagtgcgaggcaaacggcagg
aaaggttttacctccgagagcaacggctccaccaacggcactcctgtatcctccaatcag
aaagactccgctcagcccaagacccccaaaaacttccggctgcctgtgagggagacgtgt
gtgacgtgcctgaagacggtgtatcctctggagagactcgtggccaatcagcacgtttac
cacagctcctgcttccgctgctcacactgcagcaccaaactcagtttgttgaactacgcc
tcgctgcacaacaacgtctactgcaagccgcacttctcccagctcttcaaggccaaagga
aactacgacgagggcttcggccaccggccccacaaggagctgtgggagagcaaagtggag
agcgccgagacctctcctcagcccaaagccaagaccctgagcccggaggaggaggaggag
gaggagcgccccagtgtggaggactccccgctggctaaagtcaacgtgctgacggccacc
atggaggctctggggcagggggcgggggagaagtccgacagacccccggaggcccgccgg
ctgaagatctcctggcctcctcgcacggagctggaggagtcgagcggccgcagtggagcc
gccacagaggaggggtccccagggaagtctgtcaaagcaaagtggcccccagaggaggat
tcagttcctgagcagcccaaagaggccccttgtctgcgccgcacctcctccctaaaggag
cgcagcatgcccttcaccctggcaggacaaactcaagaggtgaggaagatgagtcctcct
cctcctcttggcgacgacagagatctgagtcctgaacctgcaagcatggagctgcatgat
ggaggtcacccccccgctgaggaggtcctcatcagctcaggaggagaagaggaggaggag
gaggaggctgaaaacatgccggagcagaatctcaccagagaggaggaggacaccccggat
gaagaacctgaggaagaggaggagaagatggaggaagaggaggaggatgtgatggaagaa
gaggaggaggagatgccgcctcagaaacgggagcagatgatctcgtctcctgaaggcgag
gtggaggccagtcgctcctctcaggatgtcgggttctgggacaacgaggaggcggaggat
aaggaggcggaggataaggaggcggaggataaggaggcggaggataaggaggaggtgcag
caggaggaagaggaggggctgacggtggaggatatgatcaagagaaaccgatactacgag
gaggaagaggaggcggaggatgtataa
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