Pseudochaenichthys georgianus (South Georgia icefish): 117449583
Help
Entry
117449583 CDS
T09629
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pgeo04121
]
117449583 (toporsa)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117449583 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pgeo03037
]
117449583 (toporsa)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117449583 (toporsa)
Ubiquitin system [BR:
pgeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117449583 (toporsa)
UBL E3 ligases
117449583 (toporsa)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117449583 (toporsa)
Cilium and associated proteins [BR:
pgeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117449583 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
RING_XB3-XBAT31
zf-RING_5
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
117449583
NCBI-ProteinID:
XP_033943237
LinkDB
All DBs
Position
1:complement(40560948..40565161)
Genome browser
AA seq
783 aa
AA seq
DB search
MSAIKIALQQSQKKRRRKISEAMSADVSPDSKCPICLDIFNNISYLDICLHKFCFRCIHE
WSKNKAECPLCKQSFNSIYHSIKSEQDFKKYDLQPVESGSFGSFGGVRFRYRTTLTGVHR
QMRGRTSPPPDNGVMFEASANPPQQEQERYIRRMMKRLAAKRRAATEGRAVNTVRELEMV
NFRRELYRQGVRVRNVHDGGRSRETSAEFFRTNPACLHRLIPWLKRELVVLYGGHGSLVN
IVQHIIMSRITRYDMEDGAILEELRPFLQARTEHFIHEFMSFAKSPFNMEAYDQHAAYDC
PASSSNEDGSSNSSVIAISEDEEDLTEFDPPGDSTSTLRHSIWDDETPGPSYSTTAERSR
AECLLVLDSDSDSSLEEDTRGLGASPLQMSPHSQTAATHGEVTNEECIFDISGDCIIVNV
VKPTAERTPELVQLSSDSDESADEDVKAVPLLPQHIRFSSLSPIPSPSSDPSTAGQLENV
ETDHYHQLVSKERCGSSASSKYKTSSKSDRKDTDGRYDSRSRESRVSKDIEHRRKRRSRS
AERTHFTRSRSREKGYSPSGRGDSKSERNYKKTDIDHRYKSSHNLHHTEKRSYSNRHSCS
RSPSRDSRRRERRHSPSRTYSSSSSPSTKKRSHNNKPGGKRKYKTRHLEDAAASKTELSN
SIGEGDSPSLPRKEKKRDKEKSRTKSKDGSTGKTSRSLSVELVNEDNSQERSKRHHKKKK
KHKKKSKRHRSSERTGKHSPAVITIDSDSDSDTVANDNIPQDSSTKDNPMDDPVDPAPPD
SIE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaatcaagattgccctgcagcagagccagaagaagagaagaaggaaaatctct
gaagcaatgtctgcagatgtgtctccggactccaagtgtcccatctgtttggacatattt
aacaacatttcttacctggatatctgccttcacaaattctgtttccgctgcatccatgag
tggtccaaaaacaaagccgagtgccctttatgcaaacagtcttttaattcaatttaccac
agtataaaatcagagcaagattttaagaagtatgaccttcaaccggtagagagtggctca
tttgggtcttttgggggagtgcggtttagataccgcaccactcttacaggagtccatcgg
cagatgcggggaagaacctctccacctccagacaacggtgtaatgtttgaagcttcagct
aaccctccccaacaggagcaggagcgctacatccggcggatgatgaagaggttggcagcg
aagaggagagccgcaactgaaggcagggcagtgaacactgtccgagagctggaaatggta
aacttcaggagggaattgtaccgacagggagtgagggttcgtaatgttcacgatggtggt
cgctccagagaaacctcggctgaattcttccgaacaaatcctgcgtgcctgcatagactg
atcccctggctgaaaagagaacttgttgtgctgtatgggggccacggctctttggtcaac
atagtgcaacacatcatcatgtcgcgcattacacgttatgacatggaggatggagctatt
ctggaagagctcaggccgttcctccaggcgcgcacagagcactttatccatgagttcatg
agctttgcaaagtccccctttaatatggaggcctatgaccagcatgctgcctacgactgc
ccagcctcttcctcaaatgaagacggcagctccaattcatctgtaatagctatctcagag
gatgaggaagacttgacggagtttgaccccccaggagactccacgtctactctgaggcac
tccatatgggatgatgagacgccggggccgtcttattctacgacagcagagcggagcagg
gcggagtgtctcttggtcctcgactcagactcagacagcagtttagaggaggacacacgt
gggttaggggcgtccccactgcaaatgagtcctcacagccaaacagcggcgactcatggt
gaggttaccaatgaggagtgtatatttgatatcagtggtgactgtatcattgttaatgtt
gtcaagccaacagcagaaaggactcctgagctggtccagctctcctctgactctgatgag
tctgctgacgaagatgttaaagcagtgcctcttctacctcaacacatccgcttctccagc
ctcagtcctataccttcaccgagcagtgatccaagcacggctggacagttagaaaatgtt
gaaacagaccactatcatcagttggtttcaaaagaaagatgtggctcttcggcatctagc
aaatacaagacatccagcaagtcagacagaaaagacactgatggaagatatgacagcaga
tccagggagagtcgcgtgtcaaaggacatcgagcacaggagaaagaggcgctcaagaagt
gcagagcgcacacactttaccaggagcagatctagagaaaagggatattctcccagtggc
agaggcgactcaaaatctgagagaaattataaaaagacagacattgatcaccgctataaa
tcatctcataatctgcatcacacagagaagcggtcttactcaaatcggcactcttgctcc
aggagccctagcagggactcgcggagacgtgaaaggaggcattctccttccaggacttat
tccagcagtagctccccttcgacgaaaaagagatcacacaacaacaagccaggtggaaag
aggaaatacaaaacgagacatttggaagacgcagcagcaagcaaaaccgaactttccaac
tcgattggagaaggtgactccccctcgttgccaaggaaagaaaagaaaagggacaaagag
aagagtcgtacaaaatccaaagacgggtcgacaggaaagacaagcaggagcctcagtgtg
gagctcgtcaacgaggataactctcaggagcgaagcaagcgtcaccataagaaaaagaag
aaacacaagaagaaaagtaaaaggcacaggagcagtgaacgcacagggaagcactcgccc
gctgtcatcaccattgacagtgacagtgacagcgatacggtggccaatgataatatcccc
caggacagcagcactaaggacaaccccatggacgatccagttgaccccgcccctccggac
tctattgagtag
DBGET
integrated database retrieval system
