Pseudochaenichthys georgianus (South Georgia icefish): 117449602
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Entry
117449602 CDS
T09629
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04510
Focal adhesion
pgeo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117449602 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117449602 (lamb2l)
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
117449602
NCBI-ProteinID:
XP_033943266
EnsemblRapid:
ENSPGEG00000024277
LinkDB
All DBs
Position
7:complement(37127845..37217732)
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AA seq
1838 aa
AA seq
DB search
MRPVIMMPAMAVYLSLFTLGLSVFGQELPSGPHGCTEGSCYPATGNLLIGRAVNLSATST
CGLNGPEQYCIVSHLQESDKCFECNSQHPYDRHRNSHRIENVIYLMDRDESNTWWQSVNG
EENVSIRMNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFAANCTKTFPGT
PANGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRINF
TKLNTLGDDLLDRRFDVLQKYYYALYELTVRGSCFCYGHASECAPVPGVDARDNGMIHGR
CVCKHNTEGLNCERCRHFHHDLPWRPAEAENPHTCKECNCNGHTSQCHFDMAVYLATGNS
SGGVCDDCLHNTMGRNCEMCKPFYFQDPVKDVRDPRVCVACDCDPVGSLEGGVCDSHTDL
DMGMISGQCRCKVHVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIITNGAPCDQISG
DCSCKRYVTGRYCSQCLPEYWGLSNDLAGCRQCDCDFGGAFNNRCMMENGQCDCRRHLIG
RQCSEVQPGYFCAPLDYYKYEAEDATGHSPGDTALPGKVRPQAETDCVQHLSNQLRRHRR
HRRITNSQQHRSALRRIRQLQQTPDVRSVHREHSHMVTWTGPGFARVKDGAGLVFNIDNI
PYAMEYDIMIRYEPESTEDWEAIVSVTSVLLPSSLRCGNLLPTEQLYTVTLPHRNRYIQM
PRPFCFEPSNRYVVSIRFQRHGVTHRHLTAFILIDSLVLIPKYNELPGFQGNEVEAEQRR
EEMIRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALSCQCDPQGSLSGECDRVGGQ
CRCKPNVMGRRCDQCSPETYGFGVSGCTACACHSEGSLSHQCDPATGQCQCRQGATGRQC
SDCQPGQWGFPSCSPCQCNGHADLCDPRTGECRDCRDYTTGHLCERCVDGFFGNPVLGSG
EHCRPCPCPGNPGSGHFNGHSCEADQTSNQIICTCRQGYAGSRCDQCAPGFYGNPEQPGG
QCLPCECNANIDTQDPGSCDPRTGQCIKCLYHTDGSSCDHCQNGYFGNALAHDCRRCTCV
TAGTLQSACPDGECHCDRQSGACSCRENVAGHNCDQCAANHWNYGQDRGCEPCGCDPQHS
LGAHCNMFTGQCHCRPGFGGKQCTECEQFHWGDPRVQCQECNCHPLGSEMAQCDRLTGTC
ECREGAAGKHCDECARGFAGVFPECVRCHACFQLWDDAICQIKRDLEHIQYTAQKILESG
ITPGVGDTRIKELEKKLEQVKDLISSEGSDKIHQLIGQSIDDLRAEIALSDGRLMGVTRE
LNVTTEDEGALSQTLTGLERELRDINTTVAHKHRLLQDYLTSGFTDQFDKVKRFYNESVK
AQEKCNASVSGPLSPVDRSKETRAVTEDLLDASKDKFLRALAAQNKSLNELQDKAHDLDK
SVQHLSNKVCGGHSNSSCSDSQCGAGCHDDRGVRGCGGEGCNGTVSASVAALNLTRKTTE
SLNAANEELQSVARKLQDIATLTKDVKNQAMNTLEKAQKKKEHFENNNNKLKDFIKKIRD
FLTEEGADPESIEKVALQVLSITLPVNRTALDRMVQQIKGGLSNLTNIEGIVNQTSQHIK
EAKELLQKAKDAKSLAEGVKDKANSTKQALDVSEKAIEKARAAMKEASSNLHRTRNAAAE
VDERLTRLEDKQMDVMMRLNSLSMEVEALRNKTEQNRLVAKRAKELANNATHQASSLERS
LNATEKRYQELQMKVDSLGDVGGLNNVNQKAKEIKKEAEDLLNKATKGIEQLRKLEKKFK
SNEQRMQKQRTELDELKENATVVRDEIRVQVQKYSNCV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccagtaatcatgatgcctgccatggccgtgtacctgagcctcttcacgctgggc
ctcagtgtgtttggacaggagctcccatcaggccctcacggctgcactgagggaagctgt
taccctgcgacaggaaaccttctgattggacgagccgtcaacctctccgccacctccacc
tgcggcctgaacgggccggagcagtactgcatcgtcagccatctgcaggaatcagacaag
tgcttcgagtgtaactcccagcatccctacgaccgccacagaaacagccaccgcatcgaa
aacgtcatctacctcatggacagggatgaaagcaacacctggtggcagtctgtaaacgga
gaggagaatgtcagcatcaggatgaacctggaggctgaattccacttcacacatctcatc
atgaagtttaagaccttccgacctgcagctatgatcatcgagcgttcggcagattttggc
cgcacatggcgcccctaccgctactttgccgcaaactgtaccaagacgtttcccggcacc
cccgctaacggtctgcaccacatcaacgacatcatctgtgaggagcgctactctgacatc
gaaccttccaccaatggagaggtgatttacaaagtgttggatccagccattcatgtgaaa
gacccctacagcttggacattcaagaactcctgcgtatcaccaacctgcgtatcaacttc
accaagctgaacactctgggagacgacctgctggaccggcgcttcgacgtcctgcagaaa
tattactacgccctctacgagctgacggtcagagggagctgcttctgctacggacacgcc
tcagagtgcgccccggtgccaggggtcgacgcccgggacaacggcatgatccacgggcgc
tgcgtatgcaaacacaatacagagggcctgaactgcgagcgctgccgacatttccaccac
gacctgccatggagacccgccgaggcagagaacccacacacctgcaaggagtgcaactgt
aacggccacacaagccagtgccacttcgacatggcggtgtatctggccacaggcaactcc
agcggaggagtgtgtgacgactgcctgcacaacaccatgggacgcaactgtgagatgtgc
aaacccttctacttccaagatcctgtgaaagacgtcagggacccacgagtgtgtgtcgcc
tgtgactgtgacccggtgggatcattggagggaggagtgtgtgacagtcacaccgacctg
gacatggggatgatctcaggacagtgtcgctgtaaagtccacgtcaaaggcacgcgctgc
gacgactgcaaggaaggttactacggactgagccagaacgaccctctgggctgccagcct
tgtaactgtgaccctcgtggcatcatcacaaatggagcgccttgcgaccagatcagtggg
gactgctcctgtaaaagatatgtgaccggtcgctactgcagccagtgtctgcctgagtac
tgggggctcagtaatgatctggccggctgcagacaatgtgactgtgattttggtggagct
ttcaacaacaggtgcatgatggagaacggccagtgtgactgcaggaggcatctgattggt
cgacagtgttcggaggttcagcctgggtatttctgcgctccgctggactactacaagtat
gaggctgaagacgcgactggacactcccctggtgacactgcactacctggtaaagtgcgt
cctcaggcagagacagactgtgttcagcacctcagtaaccagctgaggaggcaccgtcgc
caccgtcgcatcaccaactcgcagcagcaccgctcggcactgagacgaatccgccagctt
cagcagacgccggatgtgaggagcgtccacagagagcacagccacatggtgacgtggacc
ggtcctggtttcgcccgcgtcaaagacggtgcgggcctggtgttcaatatcgacaacatc
ccctacgccatggagtacgacatcatgatccgctacgagcctgagtccacagaggactgg
gaagctatagttagtgttacctctgtgctgctgccgtccagtctccggtgtggaaacctc
cttccaactgaacagctctacacagtcactctgccacaccgcaacagatacatccagatg
ccccggccgttctgtttcgagcccagtaatcgctacgtggtttccatccggttccagcgc
cacggtgtcacacacagacacctcactgccttcatcctcatagactcgctggtcctaatc
cccaaatacaatgagctgcctggtttccaagggaacgaggtggaggcggagcagcggcgg
gaggagatgatccgctacatgtgtctggattccttcatgatcacaccgatgcccgccctg
gccgagatgtgctccaaactcatctgcagcatatcctccatcattcacgatggggctctg
tcgtgtcagtgtgaccctcagggctccctcagtggggagtgcgaccgggtggggggtcag
tgtcgctgtaaacccaacgtgatgggtcgccgctgtgaccagtgttctccagaaacatac
ggctttggagtgagcggctgcactgcctgcgcctgccactcagaggggtctctgagccac
cagtgtgacccggccacaggacagtgccagtgcaggcagggagccacggggcgccagtgc
tcagactgccagccgggccagtggggcttccccagctgcagcccctgtcagtgcaacggc
cacgctgacctctgcgacccccgcacgggagagtgtcgggactgcagggactacacaaca
ggacacctgtgtgagcgctgtgtggatgggttctttggaaacccggtgctgggttcaggg
gagcactgccggccctgcccctgccccgggaaccccggctcgggtcacttcaacgggcac
tcctgtgaagctgaccaaacgtccaaccagatcatctgcacctgcagacagggctacgct
gggtcccgctgtgaccagtgtgcccctggtttctacggcaacccagagcaacctggcggg
cagtgcctcccgtgcgagtgcaacgctaacatcgacacccaggaccccgggtcatgtgac
ccccggaccggccagtgcatcaagtgcctgtaccacaccgacggctcctcctgtgaccac
tgtcagaacggttactttggcaacgctctggcacacgactgcagacgctgtacgtgtgtg
actgcgggcacgctgcagtctgcgtgccctgacggagagtgtcactgtgaccggcagagc
ggggcctgctcctgcagggagaacgtggcgggccataactgtgaccagtgcgccgccaac
cactggaactacggtcaggaccgaggctgcgagccctgcggctgcgacccccagcactct
ctgggagctcactgcaacatgttcaccgggcagtgccactgccgcccaggcttcggaggg
aaacagtgcactgagtgtgagcagttccactggggagacccgcgggtgcagtgtcaagag
tgtaactgccaccccctcggctcggagatggctcagtgcgacaggttgacggggacgtgt
gagtgcagggagggagcggcagggaagcactgcgatgaatgcgcccgtggtttcgccggc
gtcttccccgagtgcgtccgctgtcacgcctgctttcagctgtgggacgacgccatttgc
cagatcaaaagagacctggagcacatccagtacactgcgcagaagatcctggagagcgga
atcactccaggggtcggggacacgcgcatcaaagagctggagaagaagctggagcaagta
aaagatctgatcagttctgagggcagcgacaagatccaccagctgattggacagagcatc
gatgacctcagggctgagatcgccctgagcgacgggcgcctgatgggcgtcaccagagag
ctgaatgtaacaacagaagatgaaggggcgctgagtcagaccctgactggcctggagagg
gagctgagggacatcaacaccaccgtggctcacaaacaccgcctgctgcaggactacctc
acctcaggatttacagatcagtttgacaaagtgaagcggttttataatgagtcggtgaag
gcacaggagaaatgcaacgcctcggtgtccggtccgctcagtcctgtggaccggtccaaa
gagacccgggctgtcaccgaggacctgctggacgccagcaaagacaagttcctgcgggct
ctggctgctcagaacaagtctctgaacgagctgcaggacaaagcccacgacctggacaag
agcgtccagcacctcagcaacaaggtgtgtggcggtcacagcaattcaagttgctcagac
agtcaatgtggtgccggttgccatgacgatcggggtgtgcgtggatgtggaggagaggga
tgcaacgggacggttagcgcttctgtcgcagctctgaatctcaccaggaaaaccacggag
agtctgaacgccgccaacgaggagctgcagagcgtcgccagaaagctccaggatatcgcc
accctcacaaaggatgtaaagaaccaggcgatgaacacgctggagaaagcgcagaagaag
aaggagcactttgaaaacaacaacaacaagctgaaagatttcatcaagaagatcagagac
ttcctcaccgaggagggtgcggacccagagagcatagagaaggtggctctgcaggtgctg
tccatcacgctgcccgtcaacaggacggctctggacaggatggtccagcagatcaagggc
ggcctctccaacctcaccaacatcgagggcatcgtcaaccaaacctcgcaacatatcaag
gaagccaaggagctgctccagaaagctaaggatgctaagagcctggcggagggagtgaag
gacaaagccaacagcaccaaacaggctctggatgtgtctgagaaggccatagagaaggcc
cgcgccgccatgaaggaggccagcagcaacctgcaccgcaccaggaacgctgcagctgag
gtggacgagaggctgacgcggctggaggacaaacagatggatgtgatgatgcgcctcaac
agcctctccatggaggtggaggctctgaggaacaagacggagcagaacaggctggtggcc
aagagagctaaagagctggctaacaacgccacacatcaagcctcctccctggagaggagc
ctgaacgccacagagaagcggtaccaggagctgcagatgaaggtggactctcttggagat
gttggaggtctgaacaacgtcaaccagaaggccaaggaaataaagaaggaggcagaagac
ctgctaaacaaagccaccaaggggatagagcaactcaggaaactggagaaaaagttcaag
agtaacgagcagcggatgcagaagcagcgcacggagctggacgagctgaaagaaaacgcc
acggtggtgcgagacgagatccgggtccaggtgcagaagtacagtaactgtgtgtga
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integrated database retrieval system