Pseudochaenichthys georgianus (South Georgia icefish): 117449924
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Entry
117449924 CDS
T09629
Symbol
exosc10
Name
(RefSeq) exosome complex component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117449924 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117449924 (exosc10)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117449924 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Lipase
Motif
Other DBs
NCBI-GeneID:
117449924
NCBI-ProteinID:
XP_033943748
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All DBs
Position
7:complement(23744414..23758595)
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AA seq
890 aa
AA seq
DB search
MDSSKRKDSSNTVFADPNSENNDEEKEDLCPGFKDADAFVKYGLGAVLSATKASASLPQT
GDEYDFYRSFPGFQEFCERQGDKLLQGMSQIMQHHGCRSHMRDRNKLTGLEERFDLVVDS
NDVILERVGILLDEADGVNRSQQPVLPAGFQAPKIVVSSWNRKGSGSGSRSETFRLLHAK
NIVRPQLKFREKVDNSNTPFVPKIFIKPNAVKPLPSYFTNKQIRKERPEDLDVPAALADF
IHQQRTQEHVEDMFSHPYQYELDHFTLTESLLSKPQPLMYKPLDETKCSFIETLEDLVAL
NEKLCKLSEFAVDLEHHSYRSFLGLTCLMQISTRDEDFIIDTIELRGELYILNEAFTDPA
IVKIFHGADSDMEWLQRDLGLYVVNLFDTHQASRALNLARHSLDHLLKHYCTVESDKRYQ
LADWRIRPLPEEMVQYARSDTHFLPYIYDCVREQLLDFNHGQPGLLQCVWNKSKDISLKK
YVKPIFTEESYLELQRKQKRSFNTQQLTAFRLLFAWRDKLARQEDESTGFVLPTHMMNKI
SEEMPKEPQGIIACCNPVPPLVRQQVNELHLLVQQAREMPLLKAEIAAQKKKGLTPIKKA
DVTLFGPHDTSRVSESDLHNCSTDEMPIKQGMLFAEDEPKMDVDEENTSGLVAKAKITQF
EEPETQNDPESLPVGQMKARRIIESFENPFRMYLPSNNVHISKNAKFDPSSKIFEISKRW
KLQSIEQQQKELDAKKKAKEEKKELSKKVADERKKAKQSYQESLQNVPTVREQAAESVKP
GTKRERVASDVGESTPKPSKKLLKSAEKPEKTEPPPPEPFKPFDYRKSDLKVFAGNKPTD
NTQFDPNRQSNDFRKKKKPKGQKSNSGGGKSMSYMAGKSDRGFKHNWPKR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggattcttctaagagaaaagactcctctaacactgtctttgcagacccaaattccgaa
aacaacgacgaggaaaaggaagacctgtgtcccggttttaaagatgcggatgcttttgtt
aaatatggattgggtgcggtgttatctgccaccaaggcatccgccagcttgcctcagact
ggagatgaatatgatttctatcggagcttcccgggcttccaggagttctgtgaaagacaa
ggagataagctcctgcagggcatgagtcagataatgcagcaccatggctgcagatctcac
atgagggacaggaacaagctgacagggctggaggagaggttcgacttggtcgtggactcg
aacgacgtcatcctcgaaagagtggggattcttcttgatgaagctgatggggtgaacagg
agccagcagcctgtcctgcctgcaggttttcaggctcccaagattgttgtttccagctgg
aatcgcaagggttcaggctccggcagtcgttctgagacgttccgtctgctccatgccaag
aatattgtgaggcctcagctgaaattcagggaaaaagtcgacaacagcaacacaccattt
gttcccaagatcttcatcaagcccaatgcagtaaagcctcttccctcctattttaccaac
aaacaaatccgtaaagagagacctgaggaccttgatgtcccggctgccctggctgacttc
attcaccagcagagaactcaggaacatgttgaagacatgttttcccacccataccaatat
gaactggatcatttcacattaacagaaagccttctttctaagccacaaccgctgatgtac
aaacccctggatgagaccaaatgctccttcattgaaacattggaggatctggtggctctg
aatgagaaactttgcaaattgtctgaatttgcagtggatcttgagcaccactcctacagg
agcttcctcggcctcacctgcctgatgcagatctccaccagagacgaggacttcatcatc
gacaccattgagctccggggcgagttgtacattctcaacgaggcattcactgaccctgct
attgtcaagatatttcacggcgctgactctgacatggagtggctccagagggacttaggc
ttgtatgtcgtcaacctttttgacacgcatcaggccagccgagctctgaacttggccaga
cattccctcgaccacctgctcaaacactactgcaccgtggagtcagacaaacgctaccag
ttggctgactggaggattcgccccttgccagaggagatggtgcagtatgctcggtcagac
acacacttcctgccttacatctacgactgtgtgcgggaacagctgttggactttaaccac
gggcagcccggcctgctacagtgtgtctggaacaagagcaaagacatctctctgaagaaa
tatgtgaagcctatattcacagaggagtcatatttggagctgcagaggaagcagaaaagg
tcctttaacacccagcagctcactgccttcagactgctgtttgcctggagggacaagctg
gccaggcaggaagatgaaagcaccggatttgttctgcccactcatatgatgaacaagata
tctgaggagatgccaaaagagccacagggcatcatcgcctgctgtaaccctgtacccccg
ctggtgaggcagcaggtcaatgagctgcatttgttagtgcagcaagccagagaaatgcct
ctcctcaaggctgagattgcagctcaaaagaagaaaggactcacacccataaaaaaggct
gacgtcacgttgtttggtcctcatgatacatccagggtctctgagagcgatctccataac
tgttctactgatgaaatgcctatcaaacaagggatgctctttgcagaggatgagcccaaa
atggatgttgatgaagaaaacacaagtggccttgtagcaaaagctaaaatcacacagttt
gaggagccggaaacacagaatgacccagaatcccttcctgtgggtcaaatgaaagccagg
cgcatcattgagtcttttgaaaaccctttcagaatgtacttgccctccaacaatgtgcac
atcagcaagaatgccaagtttgacccatcttccaaaatatttgagataagtaaaagatgg
aagctgcagagtattgagcagcaacagaaggagttggacgccaaaaaaaaagcaaaggaa
gaaaaaaaggaactctcaaagaaagtggcagatgagagaaagaaggctaagcagagctac
caggagtctctccagaacgttcccactgttcgcgagcaggcagcggaatctgtaaaaccc
ggaacgaaaagagagagggtcgccagtgacgttggtgagtcgactcccaaaccgagtaag
aaactattgaaatctgcagagaagcccgagaagactgaaccacctccaccagaacccttc
aagccattcgactacagaaagtcagacctcaaagtctttgctggtaacaaaccaacggac
aacactcagttcgatccaaaccggcaatccaatgattttaggaaaaagaaaaaacccaag
ggacaaaaatctaattctggaggtggaaaaagtatgtcgtacatggctgggaaatctgac
agaggattcaagcacaactggcccaaaagataa
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