Pseudochaenichthys georgianus (South Georgia icefish): 117449936
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Entry
117449936 CDS
T09629
Name
(RefSeq) paired box protein Pax-7-like isoform X1
KO
K09381
paired box protein 3/7
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117449936
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117449936
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
117449936
NCBI-ProteinID:
XP_033943765
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Position
7:42233175..42291934
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AA seq
512 aa
AA seq
DB search
MSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEE
YKRDNPGMFSWEIRDKLLKDGVCDRSSVPSGEACSVSSISRVLRARFGKKDDEEECDKKD
EDGEKKSKHSIDGILGDKGSRMDEVSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
PTLPTYQLPESGYPTNTLSQDVNGTVHRPQPLPPSTMHQGGLASPDSGSVYGMASNRHGF
STYSDSFMGSAPSNHVNPGSNGLSPQVMSMLGNPSAVSSQQQHDFSISPLHSALDSSPSN
ALSASCSQRSAESSMKTVDSLSSSQSYCPPTYSTTSYMDPAVAAAGYQYTQYGQTAVDYL
AKNVGLSAQRRVKLSDHSAVLGLLQVETGQAY
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttgccaggaacggtaccgcggatgatgcgccctgctcccggacagaactac
ccccgaaccggattccctctggaagtgtccactcctctgggccagggccgggtcaaccag
ctggggggggtgttcattaacggccggccgctgcccaaccacatccgacacaagatagtg
gagatggcccaccacgggattcggccctgtgtcatctcccgccagctgcgcgtctctcac
ggctgcgtgtccaagatcctgtgccgctaccaggagaccggctccatccggcccggggcc
atcggaggcagcaagcccaggcaggtcgccacgccggacgtggagaagcggatagaggag
tacaagcgggacaaccccggcatgttcagctgggagatccgggacaagctgctgaaggac
ggcgtgtgtgaccggagctcggtcccttcaggtgaggcctgctccgtgagttcgatcagc
cgtgtacttcgagcacggtttggaaaaaaggatgatgaggaagagtgtgataagaaggat
gaagacggggagaagaagagcaaacacagcatcgacgggatcctgggagacaaaggcagt
cggatggatgaggtgtccgatgtggagtcggagccggacctccctctgaagaggaagcag
cgcaggagtcggaccaccttcacagccgagcagctggaggagctggagaaggccttcgag
agaacccactaccccgacatctacaccagggaggagctggcccagaggaccaagctcacc
gaggcccgggtccaggtttggttcagcaatcgaagggccaggtggcgaaaacaagcagga
gccaatcagctagcagctttcaaccacctgttgccgggtggatttcctcccacagggatg
ccaacacttccaacgtaccagctgccagagtccggctatccaaccaacactctgtcccaa
gacgttaacggtacagtccaccgcccacagccgttgcctccgtccaccatgcaccagggc
ggtctggccagccccgacagcggctcggtctacggcatggcctccaaccgccacggcttc
tccacctactctgactccttcatgggctctgctcccagcaaccacgtcaaccctggcagc
aacggactctccccgcaggtgatgagcatgctgggtaaccccagtgctgtttcctctcag
caacaacacgacttctccatctcgccgctccacagtgccttggactcctctccttccaac
gccctctcagccagctgcagccagcgctcagctgagagctccatgaagaccgtggacagc
ctttcgtcatcccagtcctactgcccccccacatatagcactaccagctacatggacccc
gccgtggctgctgccggctaccagtacacacagtacggccagactgctgtggactacctg
gcgaagaacgtgggtctgtccgctcagcgccgggtgaagctgtccgaccactcggctgtt
ctggggctgctgcaggtggagaccggccaggcctactag
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