Pseudochaenichthys georgianus (South Georgia icefish): 117449959
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Entry
117449959 CDS
T09629
Name
(RefSeq) LOW QUALITY PROTEIN: serine--tRNA ligase, cytoplasmic-like
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117449959
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgeo01007
]
117449959
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgeo03016
]
117449959
Enzymes [BR:
pgeo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
117449959
Amino acid related enzymes [BR:
pgeo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
117449959
Transfer RNA biogenesis [BR:
pgeo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117449959
Prokaryotic type
117449959
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
117449959
NCBI-ProteinID:
XP_033943789
LinkDB
All DBs
Position
7:35126076..35140959
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AA seq
520 aa
AA seq
DB search
MVLDLDQFRTDKGGDPEAIREIQRKRFKDVTLVDKLVAADTEWRKCRFTADHLNKAKNLC
SKSIGERMKKKEPVGDDDSLPEEAQNVESLTAETLSPLTVTQIKKVRLLVDEAVEKADVQ
RIKLEAERFDYLREIGNLLHPSVPISNDEDADNKVERTWGDSSVQKKYSHVDLVVMIDGF
DGERGAVVAGSRGYFLKGPLVFLEQALINYGLRLLHSKEYTPLYTPFFMRKEVMQEVAQL
SQFDDELYKVVGKGSEKSDDNSVDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGFSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIGTAEEFYQTLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLRIRYGQTKKMMDKA
EYVHMLNATMCATTRVMCAILENYQTEEGIIIPEKLQPFMPPGMTEIIKFVKPAPIDQES
TKKAKKQQDGGGGGKKKKQGGGGGDQNLPSAMETMSVNES
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgacttggaccagtttcgcaccgacaaaggtggcgacccagaagccatccgt
gagatccaaaggaagaggttcaaagatgttacactcgttgataaactggtcgctgcagat
acggagtggagaaaatgccgcttcactgcagaccacctgaacaaagccaagaacctctgc
agcaagagcattggggagagaatgaagaaaaaggaaccagttggtgatgatgactctcta
ccagaagaagcccaaaacgttgagtccctaacagctgaaacactatcgcccctgacggta
acccagatcaagaaggtgcgtttgttagtggacgaggctgtagagaaagctgatgtccag
agaataaagctggaggcggagcgcttcgattacctgagggagatcggaaacctcctgcac
ccgtctgtgcccatcagcaacgatgaggatgcagacaacaaggtggagcgtacctggggc
gactctagcgtgcagaaaaagtactcccacgtggacctggtggtcatgatcgatggcttc
gacggagagaggggggctgtggtggctgggagcagaggttacttcctgaagggcccactg
gtgttcctggagcaggctctcatcaactacggcttgaggctcctccacagcaaggagtac
accccgctctacacgcccttcttcatgaggaaagaggtcatgcaggaagtagcgcagctc
agccagtttgatgatgagctctacaaggtcgttggtaagggcagcgagaagtcagacgat
aactctgtggatgagaagtacctgatcgccacctcggagcagcccatcgccgccttcctg
agggacgagtggctgaaacccgaggacctgcccatccgctacgccggcttctccacctgc
ttcagacaggaagtgggctcccacggccgagacacgcgcgggatcttcagagtgcaccag
tttgagaagatcgagcagtttgtgtattcctccccacatgacaacaaatcatgggagatg
tttgatgagatgatcgggaccgcggaggagttctaccagacgctaggaattccttaccgc
atcgtcaacatcgtgtcaggcgccctgaaccacgctgccagtaagaagctggacctggag
gcctggttcccgggctccggggccttcagagagctggtctcctgctccaactgcctcgac
tatcaggcccggcgcctccgcatccgctacggacagaccaagaagatgatggacaaggct
gagtatgtgcacatgctgaacgccaccatgtgcgccaccacccgtgtgatgtgcgccatc
ctggagaactaccaaacggaggaaggcatcatcattccagagaagctccagcccttcatg
cctcctggtatgacggagatcataaagttcgtgaagccggctcccatcgatcaggagagc
actaagaaagccaagaagcagcaggatggaggagggggaggcaagaagaagaagcaggga
ggagggggaggagaccaaaacctgcccagcgccatggagaccatgtccgtcaacgaatca
tag
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