Pseudochaenichthys georgianus (South Georgia icefish): 117449972
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Entry
117449972 CDS
T09629
Symbol
pex6
Name
(RefSeq) peroxisomal ATPase PEX6 isoform X1
KO
K13339
peroxin-6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117449972 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pgeo04131
]
117449972 (pex6)
Membrane trafficking [BR:
pgeo04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
117449972 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
AAA_5
TIP49
RuvB_N
DUF815
Vps4_C
RNA_helicase
AAA_7
NPHP3_N
nSTAND3
AAA_25
AAA_17
Mg_chelatase
AAA_29
TsaE
AAA_28
AAA_24
AAA_14
IstB_IS21
Parvo_NS1
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
117449972
NCBI-ProteinID:
XP_033943803
LinkDB
All DBs
Position
1:42343130..42357637
Genome browser
AA seq
1049 aa
AA seq
DB search
MALQVELCCLETFPSHLSPLDVLIFQSHLDSIFQNDSDPPTVLFTPQPPQGSCKPGILLR
LHPTTEEETAGSPRPEFKTRVRLFTSRLFLQHHGLQRAGSTGTIRAMEPVSLNRVVLGAR
SRQTLLWAGGERFTEGLLELCSPGQCLLARQGDPLLPPPIHLGEDPGQAMELLVLECSPV
TQGRITADTSLVLTDCWDPPDPPAAPPPCTLIPLRLCVSDFAHYADGLGGGLSLLDNRKL
LGSGFSGVLQALECRLDVRVVDTQRWRGVKGQQGVAVDVDSCVFVSKQLLLRLGLFNQEW
VKLSRPGGSCRTADVRGGLCRQRLVSVLVLDPSLRPDLQNQEEVGFISATLWFNMTDGDV
VPVSSCTLRVKRWRPSPPAPGGPHSHSFCRSASPAFSSELHVQPVISPLYDSLSCCDAVL
SEHFSTPRLVSEGDVLTVRAEKHPDLLENNSEGIHRCPVLYFRVQKVCPSAEREEEEGDA
LLADRQHTSLYMQASTSSAVPPLSVEGSSLWSSLSPPGLLRTVELLSSIVLPHLHHSSSL
PGCTVLLHGPSGSGKMTAVSAASRRLNLHLLKVDCVSVCADTPAASEVKLSSVFQRAEAL
QPCVLLLRNLQVLLRPRGGAEEDGRVQAALSRLLHSAPTSVVVVATVCRPREVSAGVISA
FVHQVALESPSEEQRRSMLLSLSRGLPLGRDVDLERLSKVTAGFVLGDLNALLVEAGRAA
CRRLLHTCRGRQEEDLCSSGVTILNQDFSSALETLQEAQSTAIGAPKIPDVRWEDVGGLH
QVKKEILDTVQLPLQRPELLSLGLSRTGVLLYGPPGTGKTLLAKAVATECSMTFLSVKGP
ELINMYVGQSEQNIREVFLRARSAAPCVIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLA
ELDALQSSVGVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRGSQLQVLQAILRKFQ
VDSAVDLQQVVDRCPHHMTGADLYALCSDAMTAAIKRKISLIDEGLDSEESPVLVTVEDF
SSALEDFKPSVSEEELLRYRNIQQKLTAK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaggtggagttgtgttgcctggaaactttcccctctcacctcagtcctctg
gatgttttgattttccaatctcacctggactcgatcttccagaatgacagcgacccacca
accgtcctcttcaccccgcagccgccccagggctcctgtaagccgggcattttactgcgc
ctccacccgaccaccgaggaggagactgctggttcccccagacccgagttcaagacccgg
gtccggctcttcaccagccggctcttcctgcagcaccacgggctccagagggccgggagc
accgggactatccgggccatggagccggtttcgctgaacagagtggtactgggagcccgc
agcagacagactctcctctgggctggaggagagaggttcaccgaggggctgctggagctc
tgcagcccgggacagtgtctgctggcccgtcagggagacccactgctgccgccccccata
cacctgggggaggacccgggacaggcgatggagctgctggtgttggagtgcagtcctgtc
actcagggacggatcacggccgacacctctctggttctgactgactgctgggaccccccg
gacccccctgccgcccccccaccctgcacacttataccgctcagactgtgcgtgtcggac
ttcgctcattacgccgacggcctcggaggcggtctctccctcctggacaacaggaagctg
ctgggctcggggttttcgggcgtcctgcaggcgctggagtgcaggctggacgtccgggtg
gtggacactcagcgatggcggggggtcaaaggtcagcagggggtcgctgtggatgtggac
agctgtgtgttcgtgagcaaacagctgctcctcaggctggggctgttcaaccaggagtgg
gtgaagctgtcgaggccaggcggttcctgcagaacagctgatgtgaggggggggctctgc
agacagaggctggtctctgtgctggtgctggatccatcactacgtccagatctgcagaac
caggaggaagtcggtttcatatcggcaactctgtggttcaacatgactgacggagacgtg
gtccccgtgagcagctgcactctgagggtgaagaggtggagaccctctcctccagcgccc
ggcggtccgcactcgcacagcttctgtcgctcagcttctcctgcgttctccagcgagctt
cacgtccagcccgtgatttccccgctctacgacagcctcagctgctgcgacgcggtgctg
tcggaacacttcagcacgcccaggctggtttcagagggagacgtcctgaccgttcgtgct
gaaaagcatccagacctgctggagaacaactcggaggggatacacaggtgtccggtgctg
tacttcagagtgcagaaggtgtgtccgtctgcagagagagaagaagaggagggagacgct
ctcctggctgacagacaacacacctctctctacatgcaagcgtccaccagcagcgcggtc
ccccccctctcagtggagggctcctccctgtggagcagcctctctcctccgggcctcctc
aggacggtggagctcctcagcagcatcgtcctgcctcacctgcaccacagcagctctctg
cccggctgcaccgtcctccttcacggcccgtcaggaagtgggaagatgacggcagtcagc
gcagcgagtcggagactgaacctccacctgctgaaggtggactgtgtgagtgtgtgtgct
gacaccccagcagcctcggaggtgaagctcagctcggtgtttcagcgtgctgaagccctg
cagccctgcgtcctgctgctcaggaacctgcaggtcctgctccgccctcgagggggcgcc
gaggaggacggcagggtgcaggccgcgctgagccggctgctccacagcgcccccaccagc
gtggtggtggtggcgacggtctgcaggcctcgggaggtgtctgcaggggtcatatcagcg
ttcgtccaccaggtggcgctggagagtccctctgaggagcagcggcgctccatgctgctc
agcctgagccgaggccttcctctggggagagacgtggacctggagaggctctccaaagtc
accgcgggctttgtgttgggggatctgaacgctctgctggtggaggcggggcgcgcggcc
tgcaggaggctccttcacacctgtcggggcagacaggaggaggatctgtgctccagtgga
gtcaccatcctgaaccaggacttctcctcggccctggagaccctgcaggaggcccagtcc
acggccatcggagcccccaagatcccagatgtgcgctgggaggacgttggaggtcttcat
caggtgaagaaggagatcctggacacggtgcagctccctctgcagcgcccggagctcctg
tctctgggtctgagccgcaccggggtcctgctctacggacccccagggaccgggaaaacc
ctgctggccaaagccgtggccaccgagtgctccatgaccttcctcagtgtgaaaggcccg
gagctcatcaacatgtacgtgggtcagagtgaacagaacatcagagaagtgttcctcagg
gcccgctcagcagcgccctgtgtgatcttcttcgatgagctggactctctggctcccagc
agggggcgcagcggggactctgggggggtgatggacagagtggtgtcccagctgctggcc
gagctcgacgccctgcagtcgtccgtcggggtttttgtcatcggagccacaaaccgtcca
gacctgctcgaccaatcgctgctgaggcccggcaggtttgataaactggtttatgttgga
atcaacgaggaccgagggtcccagctgcaggttctccaggccatcctcagaaagttccag
gtggactctgcggtggacctgcagcaggtggtggatcgctgcccgcatcacatgaccggc
gccgacctgtacgctctgtgttcagacgccatgacggccgccatcaagaggaagatctcg
ctcatcgatgagggtctggactcggaggaatctcctgtcctcgtcaccgttgaggatttc
tcttcagcgttggaagacttcaagccgtcagtttccgaggaggagcttctgagatacaga
aacatccaacagaaactcaccgccaagtag
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