Pseudochaenichthys georgianus (South Georgia icefish): 117449986
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Entry
117449986 CDS
T09629
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04020
Calcium signaling pathway
pgeo04148
Efferocytosis
pgeo04218
Cellular senescence
pgeo04310
Wnt signaling pathway
pgeo04370
VEGF signaling pathway
pgeo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117449986 (nfatc2a)
04370 VEGF signaling pathway
117449986 (nfatc2a)
04020 Calcium signaling pathway
117449986 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117449986 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
117449986 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117449986 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117449986 (nfatc2a)
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
117449986 (nfatc2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
117449986
NCBI-ProteinID:
XP_033943815
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Position
7:complement(5266539..5288782)
Genome browser
AA seq
884 aa
AA seq
DB search
MTSFYDEKDLEEDLSRVNGPDEDLEFEYLFEYEPPCSDFAPGDQDDPNLTPHKIFNPESE
QAYPLQEASPYGLKSCSPSYIDHNITEVLSGYENQEARHYLDSTRPAGLALSPRIEITPS
REHYNYVRDSLQNQNLNISPRPTLTVPGHDSLTYREPQCLSPASSNSSTSWHSESYSPWT
SPCVSPSSGQNPGDLCPRLQNIHTGSPRTSPGTSPRTSLAEDGCQGARSPSSRPSSRSTS
PQGKRTYDMYRNPGLVLGHRSRSPSPHSGHEDHNISAHYTHSSLAEAMNGFGPGQQGLMP
TKIVKTSNQVYTLYPENHAEGNYLVSCDQDLKTTEPFFVIPPIWSKPLVSSIRSIPVASL
PPLEWPMPRRTDQYELLIEVQPKPHHRAHYETEGSRGAVKAPTGGHTVVQLHGYRGKEPL
GLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKVIHGTKVLEIPLEPKNNMKAIID
CAGILKLRNADIELRKGETDVGRKNTRVRLVFRVHIPQPGGQHVSLQVASHPIECSQRSA
HELPMVEKQDLDSCSVLGGQQMILTGQNFSSDSKVIFLEKTQDGQQIWEMEATVDKDKSQ
PSMLFVEVPSYQDSSVCHPVKVNFYVINGKRKRSQPQHFAYTPLASPSIKTEPLDEYEAD
HMGFAMPQILGLSPHSYYHTPRSALHPDSGLVSSLASCQRLSSSLPTQDARFQQQSPAIV
FSRGGKSVSGSPNLYQQSVGMLPDPHRSVLVHTGSSVGPISVGQPSIIQFSPTNHQVLRG
GDPDPQEIIYCDGYSPQAAATAHTPTPPQVPQPQHYSTVIQQQPLVQKGQQKGRDPPGTG
QMDADGQRRVTVKEENLDQAYLDDGELNEIIRKDLTAVQARGQT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgacctctttttacgacgagaaagacctggaggaagatctcagtcgagtgaacggtcct
gatgaggatttggagtttgagtacttgtttgaatatgagccaccttgcagtgactttgct
cctggagatcaagatgaccccaacctcacacctcacaaaatcttcaatcctgagtctgag
caggcgtaccccctgcaggaggcctcgccgtacggactcaagtcctgcagcccctcctac
atcgaccacaacatcacagaggttctctcgggatatgagaaccaggaggcccgacactac
ctggacagcacccggcctgcaggcctggccctgagcccccgcatcgagatcaccccgtcc
cgcgagcactacaactatgtccgggattccctgcagaaccagaacctgaacatcagcccc
cgacccaccctcaccgtgccgggccatgacagcctcacctacagagagcctcagtgcctg
agtcccgctagcagcaactcctccaccagctggcactctgagagctactccccctggacg
tccccctgtgtgtcccccagcagcggccaaaaccccggagacctgtgccccagattacag
aacatccacactggctccccccgtacctccccgggaacctcgccccgcaccagcctagcg
gaggacggctgccagggggcccgctcgccctcctccagacccagctcccgctccacctcc
ccgcagggcaaacgcacctacgacatgtacaggaacccgggcctggtcctggggcaccgg
tcccgcagcccctctccccacagcggccatgaagatcacaacataagcgcccactataca
cacagcagcctggccgaggccatgaatggttttggccccggtcagcaaggcctcatgccc
actaaaatagtcaagacgtccaaccaggtttacactctgtacccagagaaccacgcagaa
gggaactacctggtctcctgcgaccaggacttaaaaaccacagagcctttctttgttatc
cccccaatctggtccaagccgctggtttccagcatccgcagcatccctgtggcctctctc
cctcctctggaatggccgatgcccagacgcacggaccagtatgaactcctcatcgaggtg
cagcccaaaccgcaccacagagctcactatgagacggagggaagcaggggggccgtcaaa
gcccccacaggaggacacactgttgtgcagttacatggctacagaggcaaggagccgctt
ggcctgcagatcttcattggcacagcagatgagcgcatcctcaagccgcacgccttttat
caagtgcaccgcatcactgggaagacggttaccaccaccagttatgagaaggttatccac
ggcaccaaagtcctcgagatcccgctggagccaaagaacaacatgaaagcaataatcgac
tgtgcagggatcctgaagctcaggaacgccgacatcgagctgaggaagggcgagacggac
gtcggtcggaaaaacacgcgtgttcgccttgtgttccgtgtgcacatacctcaacccgga
ggacagcacgtctctctccaagtggcctcgcatcccatcgagtgctcccagcgctcggct
cacgagcttcccatggtggagaagcaggacctggacagctgctccgtgctcggaggccag
cagatgatcctgaccgggcagaacttcagctccgattccaaggtcatcttcctggagaaa
acccaggacggacagcaaatctgggagatggaagcgacggtagacaaagacaagagccag
cccagtatgctgtttgtggaggtgccgtcctaccaggactcgtctgtctgccatcctgtc
aaagtcaacttctacgtcatcaatggcaagaggaagcgcagtcagcctcagcacttcgct
tacacaccactggcatctccttccatcaagacggagcccctggatgagtatgaagcggac
cacatgggttttgccatgcctcagatcctgggtctctcccctcattcctactaccacacc
ccccgcagcgcgctccacccggacagcggcctggtctccagcctggcctcctgccagcgc
ctcagctccagcctccccacccaggacgctcgcttccagcagcagagcccggccatcgtg
ttctcccgcggggggaagagtgtgagcggcagccccaacctctaccagcagagcgtgggg
atgctgccggacccccaccgctcggtgctggtccacacgggctcctctgtggggcccatc
agtgttggccagccctccatcatccagttctcccccaccaaccaccaggtgcttcgggga
ggagaccctgatccacaggagatcatctactgcgacggctactccccacaagcagcagca
accgcacacacccccactcccccccaggtgccccagcctcagcattactccaccgtgatc
cagcagcagccattggtgcagaaagggcagcagaaaggaagagatccgcccggcacgggg
cagatggacgctgacgggcagcggagggtgacggtgaaagaggagaacctggaccaggcc
tacctagatgatggtgagttgaatgagatcataagaaaggatctgacggccgttcaggcg
agagggcagacatag
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