Pseudochaenichthys georgianus (South Georgia icefish): 117450010
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Entry
117450010 CDS
T09629
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117450010 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117450010 (nfascb)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
L1 family
117450010 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
BiPBP_C
Pur_ac_phosph_N
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
117450010
NCBI-ProteinID:
XP_033943851
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All DBs
Position
7:9983125..9995086
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AA seq
1182 aa
AA seq
DB search
MREMGTLVEPALLLLLWHSVWAFDVPLEVRQPPTIIRQSVKDHIVDPKDTMVVECEAKGN
PHPIFSWRRNGKYLNVARDSQTSMRRRSGTLDIYAWNNPEQYEAEYQCIASNEYGSAYSS
KIRLRLYRAPVWPRDILEPLTISAGLPLVLSCDPPPGPPKPETYWMSSCSYARPFNWPIQ
TATPTMQPVRPDRRISMGVNGDLYFSNILFNDSAVDYCCNARFPYRNVIQQKMPVVVKVI
TIRTVAEAAPTWLSPTGSSSSILVLQGEELLLECIAAGVPTPHITWTKNGDNLAVTPRTR
VKNFNKMIQIPKASFDDVGEYGCTATNKLGYIEHTITVRVKAAPFWLEKPTDLVLAPEEN
GRLVCRTDGAPRPTVSWFINGEPIETATPQANRQVSGDTLDLRSVTAENTAVYQCNASNQ
FGYLMANAFVNVLHATPRILGARSDLVKVIEGRRTLLDCRYFGSPVPELRWSKYGQGTIE
GNRFRTLGNGTLEIKSTQVEDQGTYVCIASNVAGRDESQVRIEVKEPTLIVKRPQNMKVM
RGTDVRFECEVTSDLTTPVKTTWMKDKRQATLGWRLSLDESNLIITNVIRGDEGNYTCVI
KSELEQKSASARLMVMDRPDPPTNLELSDPYERTVRLSWAPGDSNHNPITEYLVQFDDDD
WLPGKWRNLSTYPGNLNSVILHLTPFTYYEFRLVAINEIGMSRPSRPSTRFQSSGAPPDI
VPKNVKGVGTWRNNMEISWESLSYRDWNGPHLKYLVWWRRRDSREEWKNATTKWVRYYIY
DADTFTPYEIKVQAVNDFGLGPESPVVTGYSGEDRPLTAPLNLRVSDIESTQVTLHWDSV
TRGDMQGELKEYKAYFWRDSSQLRWQRVNRGMESRSFLVNDPEPSGVLTGLIPYSTYKLY
IVVANNRYEGPPSNNIHFSTPEGVPSTPTSFRIQQRHLDSIYVDWDLPAEPNGIITGYLL
KYQTVNASRGEEERVEEFTPNITSFSLRRYDRYTRYRFSVAAQTRLGIGDWHTEESLHYT
TEIYAQDQVDITTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDD
KDQEGSFDYRSLERIARISTLPYPRREEERGLQRGQPSIEAIMKRSDSDDSLVEYGDGGE
IQFDEDGSFIGQYTGTRRDVRELDFGGSLELHSPMNTIYSLA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatggggacactggttgaaccagcgctgctgctgcttctatggcacagtgtt
tgggcttttgacgtccctctggaagtgaggcagcccccaaccatcataaggcagtcagtg
aaggatcatattgtagaccctaaggacaccatggtcgtagaatgtgaagccaaaggaaac
cctcaccctattttctcatggaggcgtaatgggaaatacttgaacgtggcacgtgactct
caaacatcgatgcgcaggcgctcagggacgctggacatctatgcctggaacaatccagaa
cagtacgaggctgagtatcagtgcatcgcctctaatgagtatggatctgcatactccagc
aaaatcagactacgactatacagagctcctgtgtggccgagggacattctggagccattg
acgatcagcgctggtttgcctctggtcctgtcctgtgacccgccaccaggcccgcccaaa
cctgaaacctactggatgtccagctgctcgtatgcgagaccattcaactggcccatccag
acggctacccccaccatgcagcccgtgcggccggaccgcaggatatccatgggagttaac
ggagatctgtacttctctaacatcctgttcaacgactcagctgttgattactgctgtaat
gcacgcttcccatacagaaatgtcatccagcagaagatgcccgttgttgttaaagttatt
accattcgtacagtggccgaggctgcccccacctggctgtctcccaccggctcttccagc
tccatactggtcctgcaaggggaagaactgctcctggagtgtatcgctgcaggagtgcca
actcctcatattacgtggaccaagaatggtgacaacctggcagtgacgccacgaacgaga
gtaaaaaacttcaacaagatgattcaaatcccaaaggcctctttcgatgatgtgggtgaa
tacggctgcactgccaccaataagcttggatacatagagcacacaataaccgtcagggtc
aaagccgctcctttctggctggaaaagcccactgatttggtcttggctccggaggaaaat
ggacgcctggtgtgtcgtactgatggcgctcctcgtcccactgtcagctggttcatcaac
ggggaacccattgaaactgctacaccgcaggctaacaggcaggtctcaggagacacactg
gatttacgcagtgtgaccgctgaaaacactgcggtctaccagtgcaacgcttccaatcag
tttggctacttaatggccaacgcttttgttaacgtgttacatgcaacgccgcgtattctc
ggggccaggagtgacctcgtcaaggtgatagagggaagacgtaccctcttagactgccgc
tactttggctctccagtgcctgaattgcgatggtccaaatatggacaggggactattgaa
ggaaatcgttttaggacgcttggtaacgggactctggagataaaaagcacacaggtagag
gatcaaggaacctacgtgtgtatagccagcaacgtcgcaggaagagatgagagccaagtc
cgaatagaggtcaaagagcccactctaattgttaaaagaccacaaaatatgaaagtcatg
cgaggaacagatgtgcgctttgagtgtgaggtaacatcggatctcactactcctgtcaaa
accacctggatgaaagacaaaagacaggccactcttggctggagactctctctggatgaa
tcgaatctgatcattactaatgtaatcagaggcgacgagggcaattacacctgtgtcatc
aagagtgaactggagcagaagtctgcctcagcacgcctaatggtgatggaccgcccagat
cctcccactaatttggagctgtcagatccatacgagcgcactgtaagactcagttgggcc
cctggagacagcaaccacaaccctataacagagtacttagtgcagtttgatgatgatgac
tggttgcctggcaagtggagaaacctctcgacgtacccagggaacctcaactctgtcatt
cttcatctcaccccgttcacttactacgagtttcggctcgtcgctatcaatgaaatcgga
atgagtcgcccgagtcgtccatctacgcgcttccagagcagcggtgcacctccagatata
gtcccaaagaacgtgaagggtgtgggtacatggaggaataacatggagatcagctgggag
tctctgagctacagagattggaacgggccccacctgaagtatctcgtgtggtggagaagg
agagattcccgagaggagtggaagaatgccaccactaaatgggtgaggtactacatctac
gatgcagataccttcactccttacgagatcaaagtgcaggctgtcaacgacttcggcctg
ggtccagagtctcctgttgtcactggttactctggggaagaccgtcccttaacggcaccc
ctgaacctgagagtgtctgacatcgagagcactcaggtgactttgcattgggactctgtg
acacgcggcgatatgcagggagaactgaaagaatacaaggcttacttctggagggacagc
agccagctgaggtggcagagagtcaacagagggatggagtcgagatcttttttagttaat
gatccggagccgtcgggggtcctaactggactcatcccttatagcacctacaagctgtat
atagtggtggccaacaatcgatacgaagggccgcccagtaataacatacacttctcaacg
ccggaaggagtaccatccactcccacatcctttaggatccaacagcgacatcttgacagt
atttatgtcgactgggacctgccagccgaacccaacggtatcataactggatatttactc
aagtatcagacagtgaatgcctccaggggagaggaggagcgggttgaagagttcactcca
aatataacaagtttctcactccggcgatacgaccgctacacccgatacagattctccgtg
gccgcacaaactcggctcgggataggggactggcatacggaggagtcactgcattacacc
acagaaatatatgcacaggatcaggtggacatcaccactcagggctggttcatcgggata
atgtgtgctgtggctctcatcgtgctcatcctactcatcgtctgcttcatcaagaggagc
cgaggggggaaatacccagtacgggaaaagaaagacatttcattggaaccagtggatgac
aaagatcaggagggatcgtttgactacaggtctcttgaaaggatagcacgtatctccact
cttccttacccccgacgagaggaggaaagagggcttcaaagaggccagccgtccatagaa
gcgataatgaagcgatcagacagtgatgacagtctggtggagtacggcgacggaggcgag
atacagttcgacgaggacggttctttcatcggccagtacacaggaaccaggagagatgtc
agggagttggactttggaggaagtctagagctccactctccgatgaataccatctactcc
ctggcgtaa
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