Pseudochaenichthys georgianus (South Georgia icefish): 117450029
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Entry
117450029 CDS
T09629
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4-like isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117450029
04082 Neuroactive ligand signaling
117450029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117450029
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117450029
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117450029
NCBI-ProteinID:
XP_033943890
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Position
7:32558477..32572077
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AA seq
650 aa
AA seq
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MTSSRSWREFSMDLYKCLSVLFLILPSEAFSQVGLWAQGEERLLHDLFASYNKLSRPVKN
TTDTVLVHFGLSIAQLIDVDEKNQMMTTNVWVKQEWDDYKLRWNPEEYENVTSIRIPSEI
IWRPDIVLYNNADGDFAVTHLTKAHLFHDGRIKWMPPAIYKSSCSIDVTFFPFDQQSCKM
KFGSWTYDRSKIDLISMASDVDQMDYWESGEWVIINAVGKYNTKKYECCVEIYADITYYF
IIRRLPLFYTINLIIPCLLISCLTVLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIP
STSLVIPLIGEYLLFTMVFVTLSIVITVFVLNVHHRSPQTHGMPHWVRRVFLDMVPRVLF
MKRPPGTAKQNCKKLIEMMHRPTTISATGNSLTYWTGLETGFRQMSQVNDTLPKTPSDSP
SIHVCSPSPPSSPLENHNGNDHPMKANLFSRPGSGQYSVVSEKQPLRVLNCAALSSSHMS
LPLTLPMCPLRSLSREEIHTMAPNGRSHSAEQMSDQQKELPQKAGHRCRSSSFQYCCLHD
EGPGIMGIAGWVKKQPATDQPTEPLRVEPIKDVCTQQTLGLIISPAMQRAIEGVQYVADH
LRAEDEDFSVKEDWKYVAMVIDRIFLWMFVLVCILGSVGLFLPPWLAGMI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagcagaagttggagggagttcagtatggatttatacaaatgtttgagcgta
cttttcctcattcttccttcagaagctttttcccaagttggactttgggctcaaggcgag
gagcgacttctccatgatttgtttgcaagttacaataagctgtcccggcctgtgaaaaac
acaactgacacagtgctcgtccactttggactgtccatcgcccagcttatcgatgtggat
gagaagaaccagatgatgaccacaaatgtctgggtgaagcaagaatgggatgattacaaa
ctccgctggaacccggaggaatacgaaaacgtcacctccatccggattccctcagaaatc
atctggaggccagacattgtgctctacaacaacgctgatggcgactttgcggtaactcac
ctcacgaaggcccacctgttccatgacggtcggataaagtggatgccaccggccatttac
aagtcttcgtgcagcatagacgtcacatttttcccatttgaccagcaaagctgcaagatg
aagtttgggtcgtggacctacgaccgctccaagatcgatctgatcagcatggccagcgat
gtggatcagatggactactgggaaagcggggagtgggtcattatcaacgcagtgggcaag
tacaacaccaaaaagtacgagtgctgcgtggagatctacgcggacatcacttactacttc
atcatccggaggcttccgttgttctacaccattaacctcatcatcccctgtctgcttatc
tcctgtttgactgtgctggtgttttatttgccatcgcaatgcggagagaagatcaccttg
tgtatctccgtcttactgtccctaactgtattcctcctgctgatcacagagattataccg
tccacatcgctggtgattccattaattggggaataccttctgttcaccatggtctttgtc
acgctttccatcgtaattaccgtctttgtgttaaacgttcatcaccggtccccacaaacc
cacggcatgcctcattgggtgcggagagtattcttggacatggtgcctcgagtcctcttc
atgaagcgtccgcctggcaccgccaagcagaactgcaagaagctcatagagatgatgcac
cgtccgaccaccatatctgcgacgggcaactctctgacctattggacagggttagagacg
gggttcagacagatgagccaggtaaacgatacccttccaaagactccatccgacagtcca
agcatccatgtgtgctcaccctccccaccttcttcccctcttgagaaccacaacgggaat
gatcacccaatgaaggccaaccttttctcccgccctggatctggacagtattcggttgtc
tctgagaaacaacccctacgggttctcaactgtgccgccttgtcttcttcccatatgtcc
ttaccccttactttaccaatgtgcccactccgcagcctatccagggaagaaatacacaca
atggccccaaatggtcgttcccacagcgcagagcagatgtctgaccaacagaaggagctt
cctcagaaagccggccatcgatgtcgctccagcagcttccagtactgctgtctgcacgat
gaagggccaggaatcatgggaatcgcaggctgggtgaagaaacagcctgccacagatcaa
ccaacagaacccctcagagtggagcccattaaagatgtgtgtacccaacagaccctgggt
ctgatcatttccccagccatgcagcgggccatagagggagttcagtacgtcgctgatcat
ctcagggcagaggatgaagatttttcagtgaaagaggactggaagtatgtggccatggtc
attgacaggatattcctctggatgtttgtcctggtgtgtatactgggatctgttggactc
ttccttcctccttggctggctggaatgatctag
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