Pseudochaenichthys georgianus (South Georgia icefish): 117450041
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Entry
117450041 CDS
T09629
Symbol
cntn3a.1
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pgeo04515
]
117450041 (cntn3a.1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
117450041 (cntn3a.1)
Cell adhesion molecules [BR:
pgeo04515
]
Immunoglobulin superfamily
Contactins
117450041 (cntn3a.1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pgeo00537
]
Others
117450041 (cntn3a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_6
C2-set_2
Pur_ac_phosph_N
V-set_CD47
Tissue_fac
fn3_2
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
117450041
NCBI-ProteinID:
XP_033943916
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All DBs
Position
7:24065852..24181980
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AA seq
1028 aa
AA seq
DB search
MELPWKLLLLLSLVECMAGNGVLLRPVFTKQPGSVVFPLQPGENRREVVFSCEAQGHPPP
FYRWKLNDSFIMPRLGSRYSLMGGNLHISQLNKEEDIGIYQCLASNSLGTIVSREASLHI
AYMENFKTQRRSPVRVREGQGVVLLCGPPPHSGELTFTWIFNEYPSFVIQDTRRFVSQKT
GNLYIAKVEPSDVGNYTCVVTNTVTKSSVQGPLTPLVLRVDGVMGEYEPKIEVQFPEVVP
VAKSSTVKLECFALGNPVPTISWRRQDGASFGRKVDINKASGVLEIPYFQLEDAGIYECV
AENTRGRNSAKGKLSFYAAPHLTEKPQDVQKTIDDMLVWECKASAKPKPSYRWLKNGEPL
DSMEHDRVQVNNGVLTISSLNLADIGMYQCVAENKHGRIFTNAELRVVAIAPDFSQNLLK
AQTLARQGGDVLIECRPRMSPRGVISWRKGKEALRESHRVTVLDNGSLRISNVTKMDAGI
YTCVARNQFGVASSAGSLLVKEPTAITSPAGHLDVTVGESIVLPCQVSHDPTLDLKFTWF
FNEQLIHFGSHWAFFEKIGGRSAGDIMIRNIQLRHAGKYTCAVQTKVDSVSIATDVVVRG
PPGPPVDCHVTAMTETTASVSWGPGMDNHSPILSYTIQARTPFSLGWQAVTTVPELLGGK
QLSSTVNELSPWVEYEFRVLATNSIGTGEPSKPSKKSRTKEMLPRVTPGRVNGGGGGRSE
LVITWEPVPEELQSGPGFGYVVAFRPLGAQGWMQAAVTSPDASRYVFKNDSIPPFSPYQV
KVGVYNNKGEGPFSPVTTIYSAEEEPSRAPGRLRARSVSASEVEVTWRPLAWSNNRRRIL
GYELQYWGERQKQDTASVIRTVGNKTSVLIRDLEGSSTYYMSLRAYNSAGVGPQSIIVNV
TTKKPPPSQAPVKIMWNTSNSKVILRWDQVHALENESEVTGYKVMYSQDKHSHPSVVETN
TTSLELSLPVNQDYVIQIKPFSEGGEGSSSQITIPKIAGSIAKGAAPESSPYSLVNLAAL
IITVRTVL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggagttgccatggaaacttctacttctgctgtcattggtggagtgtatggcaggaaac
ggagtcctgctgcggcctgtgttcaccaaacaacctggcagtgtggtattcccgcttcaa
cctggcgagaatcgcagagaagtggtgttcagctgtgaggcccagggacacccaccaccc
ttctacaggtggaagctcaacgactctttcatcatgcccagactggggtcacgctactct
ctcatgggaggaaacctacacatcagccaactgaacaaagaggaggatatcggcatctat
cagtgcctggcatcaaactccttgggcaccatcgtcagcagagaggccagtctacacatt
gcctacatggagaacttcaagacccagagaagaagtccagtgagggtccgtgaaggtcaa
ggagtggtccttctgtgcggcccgcctccgcactctggagaactaaccttcacgtggatc
ttcaatgagtacccatcgtttgtcatccaggacacgcggcggtttgtgtcccagaagaca
ggaaacctctacatcgccaaagtggagccctctgatgtgggcaactacacctgtgtggtc
accaacacggtcaccaagagcagtgttcaaggaccactaactcctctggtgctgcgggtt
gatggtgtgatgggcgaatacgagccaaagattgaagtgcagtttcctgaagttgtccct
gttgctaaaagctcaaccgtcaaactagagtgttttgcacttggaaacccagtgccaacc
atcagctggagaaggcaggatggagcctcttttggcaggaaggtggacataaataaagcc
agcggcgtgttagaaatcccttacttccagctggaggatgcaggaatatatgaatgtgtg
gctgaaaacaccagaggaagaaactcggctaaaggaaagctgtctttctatgctgcacca
cacttgactgagaagcctcaagatgttcagaagaccattgatgatatgctggtgtgggag
tgcaaagccagcgccaagcccaaaccctcataccgctggctgaagaacggagagcctctg
gactccatggaacacgatagggtccaggtgaataacggagtgctgacgatcagcagcttg
aatctggctgacatcggcatgtatcagtgtgtggcggagaacaagcacggccgaatcttc
accaacgctgagctccgagtcgtagccatcgctccagacttctcccagaacttgttgaag
gcccagactttggcccgacaaggcggcgacgttctgatcgaatgcaggcccaggatgtct
cctcggggtgtcatttcatggaggaaggggaaagaagcccttagagagagccacagagtt
actgttttggataatggcagcctacggatttccaatgttacaaaaatggatgctgggatc
tacacgtgtgtggccagaaaccagtttggagtagcgagcagtgctggcagccttttggtg
aaagagccgacggcgatcaccagtccagctggacatctggacgtgaccgtgggtgagagc
atcgtgctgccctgccaggtgtcacatgaccccacgctggacctcaagttcacctggttc
ttcaacgagcagctcatccactttggaagtcactgggcgttttttgagaaaatcggtggg
cgctcggctggtgacataatgatacgcaacattcaattgaggcatgctgggaaatacacg
tgtgctgttcaaacgaaggtggacagtgtgtcgattgccactgatgtggtcgtcagaggt
ccccccggtccccctgtggactgtcacgtgactgcgatgacggagaccactgcctccgtg
tcctggggtcccgggatggacaaccacagccccatcctcagctataccatccaggccaga
acgcccttctctcttgggtggcaagccgtaacaaccgttcctgagcttctcggggggaag
cagctgtcatccaccgtcaatgagttgagtccctgggtggagtacgagttcagagtcctg
gcaaccaacagcataggaacaggagagcccagcaaaccctccaaaaagtcccgcaccaaa
gaaatgcttccccgggtgacgcctggcagagtgaacggaggaggtggaggacgctcagag
ctggtcatcacttgggagcccgttcctgaggagctccagagtgggccgggcttcggctac
gtggtggctttccgcccactgggggctcagggctggatgcaggctgctgtcacgtccccc
gatgcctcgagatacgtcttcaagaacgacagcatcccccccttctccccttaccaagtc
aaagtcggggtttacaacaacaagggagaaggaccttttagtccggtgaccaccatctac
tcggcggaggaagagcccagcagagctccaggcaggctgagggcgaggagtgtatcagcg
tccgaggtagaggtcacctggaggccgctggcctggagcaacaaccgaagacgcatcctc
ggctatgagttgcagtactggggtgagaggcagaagcaggacacagccagtgtgatcagg
acagtggggaataaaacgtcagtactcatcagagatctggagggcagcagtacatattac
atgtccctgcgggcctacaacagcgccggagtgggtccacagagcatcatagtcaatgtc
acaaccaagaaaccaccacccagtcaagcccctgtcaaaatcatgtggaacacttccaac
tccaaggtcatcctgaggtgggaccaagtgcacgctctggagaatgagtcagaagtcacc
ggatataaggtgatgtacagccaggacaaacacagccaccccagtgtggtggagaccaac
accacctccttggagttgtcgctgccagtcaaccaggactacgttatccagataaaaccc
ttcagtgagggaggggaaggcagcagcagccagattaccatccccaaaatagcaggctcc
atagccaaaggagcagctccagagtcttctccatattccttggtcaaccttgcagcgtta
atcatcacagtcaggactgtactatga
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