Pseudochaenichthys georgianus (South Georgia icefish): 117450057
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Entry
117450057 CDS
T09629
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6 isoform X1
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04080
Neuroactive ligand-receptor interaction
pgeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117450057 (chrna6)
04082 Neuroactive ligand signaling
117450057 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pgeo04040
]
117450057 (chrna6)
Ion channels [BR:
pgeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117450057 (chrna6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
117450057
NCBI-ProteinID:
XP_033943984
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All DBs
Position
1:complement(13501857..13555009)
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AA seq
523 aa
AA seq
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MQPAARWTLRLLIVGLMAQGCFSSKAEDRLFRKLFRRYNQFIRPVENVSDPVTVEFEVSI
SQLVKVDEVNQIMETNLWLRHIWNDYKLRWMPREFDGIEFIRVPSNKIWRPDIVLYNNAV
GDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKID
LVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINL
IIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYL
LFTMIFVTLSIVITVFVLNVHYRTPMTHTMPDWVRSVFLRVLPRIMLMRRPIDEDSKTGG
LDSSGEAGGAGGGGGGGGGKGGKKRKNSLLLQVGGGSLNCLEFGDSKFLSVDGCTGKKCT
CPCQHGKETPDTPDLGKITRQLSPTSISTVVAFSVLSPEVKQAIESVKYIAENMRSRNKA
KEVEDDWKYVAMVIDRIFLWVFVTVCVLGTVGLFLQPLCGFVS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggcggcgagatggactttgcggcttcttatcgtgggtttgatggcgcaaggc
tgcttctcatccaaggcagaggaccggctcttcaggaaactcttcagaagatataaccag
ttcatccgaccagtggagaatgtgtctgaccccgttaccgtggagtttgaggtctccatc
tcacagctggtcaaagttgatgaggtgaaccagatcatggaaacaaatctatggctcaga
catatttggaatgactacaagctgcggtggatgcccagggagtttgatgggatcgagttc
attagagttccatccaacaagatctggagacccgacatcgtgctctacaacaacgctgta
ggtgatttcctggttgaggataagaccaaggctctgctgaagtttgatggtaccatcacc
tgggtccctccagccatttttaagtcttcctgtcccatggacatcacctacttccccttc
gactatcagaactgctccatgaagttcggctcctggacttatgacaaagccaagattgac
ctggtgctaatcgggtctaaggtgaacctgaaagacttctgggagagtggcgagtgggaa
atcattgacgctcctggctacaagcatgatatcaagtacaactgctgtgaggagatctac
ccagacatcacctactccttctacatcaggcgcttgccactcttctacaccatcaacctc
atcatcccctgcctcctcatctctttcctcacagtgctggttttctatctcccgtccgac
tgtggtgagaaggtcacgctctgtatctccgtcctgctctccctcactgtgttcctgctc
gttatcaccgagaccatcccctccacgtcgctggtcatcccgctcattggagagtacctg
ctctttacaatgatttttgtcacgctcagcatcgtcatcaccgtgttcgtgctgaacgtt
cactaccgcacgccaatgacccacactatgccggattgggtgcgctcggtgtttctcaga
gtgctaccgaggatcatgctgatgcggagaccgattgacgaggacagcaagactgggggg
ttggacagcagtggggaggcaggaggagctggagggggaggaggaggcggaggagggaaa
ggagggaagaagaggaagaatagcttgctgctgcaggtcggaggaggctccctcaactgc
ttggagttcggggacagtaagttcttgtccgtggacggctgcactgggaagaaatgcact
tgcccctgccagcatgggaaggagaccccagatacaccagacttggggaaaataacacgt
cagctgagtccaacaagcatcagcacggtggtggccttttctgtgctgtcgcctgaggtc
aaacaggccatcgagagcgtcaagtacatagctgagaacatgaggagtcgcaacaaggcc
aaagaagtggaggatgactggaagtacgtcgccatggtgatcgataggatcttcctttgg
gtgtttgtgaccgtatgtgtcctgggaactgtgggcctcttcctccagccgctttgtggc
tttgtttcataa
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