Pseudochaenichthys georgianus (South Georgia icefish): 117450058
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Entry
117450058 CDS
T09629
Name
(RefSeq) protein jagged-1a-like isoform X1
KO
K06052
jagged-1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo04330
Notch signaling pathway
pgeo04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117450058
04371 Apelin signaling pathway
117450058
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pgeo04090
]
117450058
CD molecules [BR:
pgeo04090
]
Proteins
117450058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_2
DSL
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
EGF_CA
EGF_PEAR1L
EGF_3
Motif
Other DBs
NCBI-GeneID:
117450058
NCBI-ProteinID:
XP_033943943
LinkDB
All DBs
Position
1:complement(42669111..42707604)
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AA seq
1249 aa
AA seq
DB search
MTVTRSSVLFLQTLLLSARIQVSSASGHFELQILSMQNVNGQLQTGACCDGPRDVTERRC
SADECDTYFRVCLKEYQLKISSAGPCSFGTASTPVLGGNNFSLRNAKSNARARIVLPFSF
AWPRSYTLIVEALDFNNDSSSGNVGGVMIEKAVLSGMINPSRQWQSLQHTGPVAQFHFQV
RLSCDEHYYGFGCNKFCRPRDDFFGHYECDHNGNKTCLDGWAGLDCNTAICRQGCSTEHG
SCKVPGECKCLYGWQGDYCDHCIPHPGCVYGSCMEPWQCLCDTNYGGQLCDKDLNTCATL
QPCSNGGTCSNTGPDKYHCSCPEGFSGVRCERADHACLSNPCLGGGSCVETSQGFECRCS
SGWTGPSCSINVDECVWNPCSHGGTCQDLINGFRCTCPAQWSGKTCLIDANECDGDPCLN
AHSCRNLIGGYFCECLPGWTGKNCDTNINDCRGQCQNGATCKDLVNAFQCVCAPGFGGER
CETDVDECASEPCLKGGRCHDEVSGFHCLCPPGSSGSRCQLDIDYCLPSPCENGGECFNL
GSEYVCECPEDFEGKNCSRLKDHCRTAPCKVIDSCTVAVASNSTPGGVRLISSNVCGPHG
RCRSHAGGQFSCACEEGFTGTYCHENINDCELAPCLNGGTCIDKVSQYLCICADGWDGST
CHNNIDDCSSAPCQNRGVCRDLVNDFFCQCNNGWKGKTCHSRVSQCDEETCNHGGTCYDE
GDAFKCHCAAGWEGATCSVAKNSSCVSSPCENGGTCVVDGDSFSCVCKEGWEGATCSQNA
NNCSPHPCYNSGTCVDGDNWYRCECSPGFAGPDCRININECQSSPCSFGSTCVDEINAFR
CICPPGRAGPRCQEASGRPCVLGGGQLALDGSRWDDDCNICSCHNGRTTCSKFQCGPRPC
SLLSQPPGSECPEAQTCEALQDERCFVKPCPGQGECWSPAHQAPPTDSCDSESGCANLTF
TFNKDVMATGVTVEQVCRELRSLYVEKNLSSSSFSSSSSSVSITCEPSLSTNNEIHVAIS
TEDQRRGLSFVKESTDRIMDLVSKRSANSSIISAIAEVRVQRRQNHNPNADHIVPLLISA
VVFIWALAVTSMLLWCVRRRRRKRSAHTGVNTQVASSSSTSSALAPVTEDNNALHNSVST
PREQLNHIKNPIEKNTPNLQHHLLHHHHICEDKNAVNAKIRKSDDGGQSDEEEMDKRLQK
ARFPRAPPAYSLVDWEERPPHHLTGKHWTNKQDNRQLQSQSVNRTEYIV
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgacgcggagctcggtcctcttcctgcagaccctgctgctctctgcccgcata
caggtttcttcagcttcgggacactttgagctccagattttgtcgatgcagaacgttaac
ggtcagctgcagaccggcgcctgctgcgacggaccccgggacgtgacggaacgacgatgc
tcggcggacgaatgcgacacctacttccgggtgtgtctgaaggagtaccagctgaagatc
tcctcggccgggccctgcagcttcggcaccgcctccacccccgtgctcggtggaaataac
ttttctttacgcaacgccaagagcaacgccagagccaggatcgtgctgccgttcagcttc
gcttggccgagatcctacacattgatcgtggaagccttggacttcaacaacgactcgtcc
tccggcaatgtcggtggggtgatgattgagaaagccgtcctctcggggatgatcaacccg
agccggcagtggcagagtctgcagcacaccggccccgtggctcagttccacttccaggtc
cgcctcagctgcgacgagcactactacggcttcggctgcaacaagttctgccgcccgcgg
gacgacttcttcggacactacgagtgcgaccacaacgggaacaagacgtgtctggacggc
tgggccggactagactgcaacactgcgatctgcagacagggctgcagcacagagcacgga
tcctgcaaagttcctggagagtgcaagtgtctgtacggctggcagggggattactgcgac
cactgcatccctcaccccggctgtgtgtacggcagctgtatggagccctggcagtgtctc
tgtgacaccaactatggaggacagctctgtgacaaagatctgaacacgtgtgcgacgctg
cagccgtgttcaaacggaggaacctgcagcaacacgggaccggacaagtaccactgctcc
tgccccgagggcttctctggggtccgctgtgagagagcggaccacgcctgtctgtccaac
ccctgcctgggggggggaagctgtgtggagacgagtcagggcttcgagtgtcgctgctcc
tccggctggaccggcccctcctgctccatcaatgtggacgagtgtgtgtggaacccctgc
agccacggaggcacctgtcaggacctgatcaacgggttcaggtgcacctgcccggcccag
tggagcgggaagacctgcctcatcgatgcaaacgagtgtgacggcgacccctgcctcaac
gcccactcctgcaggaatctgattggaggatatttctgcgaatgcctcccaggttggacg
ggaaagaactgtgacaccaatatcaacgactgccgaggccagtgtcagaacggagccacg
tgcaaggacctggtgaacgcgtttcagtgtgtgtgcgctccgggtttcgggggtgaacgc
tgcgagacggacgtggacgagtgcgccagcgagccgtgtctcaaaggcggccgttgccat
gacgaagttagcggcttccactgcctctgtccacccggttcctctgggagtcgctgtcag
ttggatatcgattactgcctccccagtccgtgtgaaaacggcggcgagtgtttcaacctg
gggagcgagtacgtctgtgaatgtcccgaagacttcgaggggaagaactgctcgcggctg
aaggaccactgccgcaccgcgccctgcaaagtgattgacagctgcacggttgccgtggcg
tccaacagcacgccgggcggggtgcgtttgatttcgtccaacgtgtgcgggccgcacggt
cgctgtcggagtcacgcgggcggacagttcagctgcgcgtgtgaggaggggttcactggg
acctactgccacgagaatatcaatgactgtgagctcgccccctgtctgaacggagggacc
tgcatcgataaagtcagtcagtatctctgcatctgtgcagacggctgggacggatccacc
tgccacaacaatatcgacgactgcagctcggctccgtgtcagaaccgcggcgtctgtcga
gatctggtcaacgatttcttctgccagtgtaacaacggctggaaggggaagacctgccac
tcacgagtgagtcagtgtgacgaggagacgtgtaaccacggaggaacctgctacgatgaa
ggagacgccttcaagtgtcattgtgctgccggctgggagggcgcgacctgcagcgtcgcg
aagaacagcagctgcgtgtcgagtccctgtgagaacggaggaacctgcgtggtggacgga
gactcgttcagctgcgtctgcaaggaaggctgggagggcgccacctgcagccagaacgcc
aacaactgcagtcctcatccctgctacaacagtgggacctgtgtggatggagacaactgg
tatcggtgtgaatgttctccgggtttcgccggtccagactgcagaatcaacatcaatgag
tgccagtcgtcgccctgctccttcggctccacatgtgtggatgaaatcaacgctttccgc
tgcatctgtcctccaggaagagctggcccccgctgccaagaagcgtcggggcggccctgt
gtgctggggggggggcagctggctctggacggcagccggtgggacgacgactgcaacatc
tgcagctgccacaacgggaggaccacctgcagcaagtttcagtgcggccctcgcccctgc
agtctcctctctcagcctccaggctctgagtgcccggaggctcagacctgcgaggcgctg
caggacgagcgctgcttcgtgaagccgtgcccggggcagggggagtgctggagccctgcc
caccaggccccgcccactgacagctgtgactcagagagcggctgcgccaacctcaccttc
accttcaacaaggacgtcatggcaacgggtgtgacggtggagcaggtttgtcgtgagctc
aggagcctctacgtcgagaagaacctgtcctcctcttccttttcctcttcctcctcctcc
gtctccattacctgcgagccgtcgctcagcaccaacaacgaaatccacgttgccatctcg
acggaggaccagaggagaggtctgagcttcgtcaaggaaagcacagacaggatcatggat
ctggtgagcaagaggagcgccaacagcagcatcatcagcgccatcgcagaggtccgggtc
cagaggcggcagaaccacaaccccaacgcagaccacatcgtgcctcttctgatatccgcg
gtggtcttcatctgggcgctggccgtcacctccatgttgctgtggtgtgtgaggaggagg
cggaggaaacggagtgctcacaccggggtcaacacacaggtggcatcatcatcatcaaca
tcatcagctttagccccggtaaccgaggacaacaacgccctccacaacagcgtcagcacc
ccccgcgagcagctcaaccacatcaagaaccccatcgagaaaaacacccccaacctccag
caccacctcctccatcaccaccacatctgcgaggacaagaacgcggtcaacgccaagatc
aggaagtcggacgacgggggccaatcagacgaggaggagatggataagaggcttcagaag
gcgaggtttcccagagccccgccggcgtattcgctggtggactgggaggagcgacccccc
catcatctgacaggcaaacactggacaaacaaacaggacaacaggcaacttcagtcacag
agtgtaaacaggacggagtatattgtataa
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