Pseudochaenichthys georgianus (South Georgia icefish): 117450157
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Entry
117450157 CDS
T09629
Name
(RefSeq) CXXC-type zinc finger protein 1-like
KO
K14960
COMPASS component SPP1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117450157
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117450157
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
117450157
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
117450157
COMPASS/SET1 complex (yeast)
117450157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
117450157
NCBI-ProteinID:
XP_033944120
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All DBs
Position
7:2909390..2926599
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AA seq
633 aa
AA seq
DB search
MSEEAAGAERGPEEEEEEGGRGGGDDGEEEGGGRKCAMKNPKGPTYCICQKADINCFMIG
CDCCSEWFHGDCVGVSEKAAKSIRVWYCPSCRDKDSSLEIKYRPKKTKEKESEEKPEGDG
SSTPQPKIDRRRGSQIKRSARMCGECEACLRTEDCAQCDFCKDMKKFGGPNKIRQKCRLR
QCEVRARKMLRVKDEEMKRSSRGRCLTRKGAGHYTEEEDDDEEDDDDDDVAFSESELELY
EQYKAAGYRDLMWHSEDEEEEQSESLRKKAVKVKHVKRQEKKPEKKVEKKPEKKVEKKVE
KKVEKKKTVSAPKEEVKPRRHKAKQRHKERVRHSERGGEGGAKEVGGALRQCLGPGCVQA
ARANSKYCTDDCGMKLAANRLYEILPQRIQQWQQSPCIAEEMGRRQLERIRKEQQASRLR
LTNMEKRFHELEGIIANAKQQQVLQHEEATDGDGDDTDLQIFCVSCSQPVNPKVALRHME
RCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIPADEV
CGCPLVKDVFEPTGEFCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNLR
TAMTNRAGLMALMLHQTIQHDPIATDLRSAKDR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaagctgcaggagcagagcgaggcccggaggaggaagaggaggaaggagga
agaggaggaggggatgatggtgaagaggaaggaggaggaagaaaatgtgcgatgaagaac
cccaaaggtcctacatactgcatctgccagaaagcagacatcaactgtttcatgataggg
tgtgactgctgctccgagtggtttcatggggattgtgttggagtgtcagaaaaagcagca
aaatccatcagagtgtggtactgcccgtcctgcagagacaaagactcctctctggagatc
aaataccgtccgaagaaaaccaaagagaaggagagtgaggagaagcctgagggagacggg
agctccacccctcagcccaagattgacaggaggcggggctcacagatcaagcgttcagcg
cggatgtgtggggagtgtgaggcctgtctgcgcacggaggactgcgctcagtgtgacttc
tgcaaagacatgaagaagttcggaggtccgaataaaatcagacagaagtgtcgcctccgg
cagtgtgaggtccgagcccggaagatgcttcgagtcaaagacgaggagatgaaacggagc
agcagggggcggtgcctaacgaggaaaggggcggggcattatacagaggaggaggatgac
gatgaggaggatgacgatgatgatgacgtggccttcagtgagagcgagctggagctttac
gagcagtacaaagctgccggatacagagacctgatgtggcacagcgaggatgaggaggag
gagcagtcggagtctctgaggaagaaggcggtgaaggtgaaacacgtgaagagacaggag
aagaagccggagaagaaggtggagaagaagccggagaagaaggtggagaaaaaggtggag
aagaaggtggagaagaagaaaacggtctccgctcccaaagaggaggtgaagcctcgccgt
cacaaagcgaagcagcgccacaaggagcgagtgcgtcacagcgagcgaggaggagagggc
ggggctaaggaagtgggcggggccttgcgtcagtgcctgggaccaggatgtgtccaagca
gcgagggccaactccaaatactgcaccgacgactgcggcatgaagctggccgccaatcgt
ctgtatgagatcctgcctcagaggatccagcagtggcagcagagtccctgcatcgccgag
gagatgggccggaggcagctggagcgaatcaggaaggagcagcaggcgtcgaggctccgg
ctgacaaacatggagaaacgtttccacgaactggaaggcatcatcgccaacgccaagcag
cagcaggtcctacagcacgaggaggcgactgacggtgacggcgatgacacggaccttcag
atcttctgtgtttcctgcagtcagcccgtcaaccccaaggtggcgctgagacacatggag
agatgctacgctaagtatgagagtcagacatcttttggatccatgtaccccacgcggata
gagggggcgacccggttgttctgtgatgtgtataaccctcagagtaagacgtactgcaag
cggctgcaggttctgtgtcctgaacactccagagacccaaagatcccagcagacgaggtg
tgcggctgtcctctggtgaaagacgtgttcgagccgacgggagagttttgtcgtgtgtcc
aagaggaagtgtaacaaacattactgctgggagaaactgcgccgcgcagaggtcgacctc
gagagagtccgagtgtggtataagctggatgagctgtttgagcaggagaggaatctgagg
acggcgatgacgaatcgagccggtttaatggctctgatgctgcaccagaccatccaacac
gaccccatcgccacagacctgcgctctgccaaggacaggtag
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