Pseudochaenichthys georgianus (South Georgia icefish): 117450666
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Entry
117450666 CDS
T09629
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo00310
Lysine degradation
pgeo00514
Other types of O-glycan biosynthesis
pgeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117450666 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117450666 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgeo01003
]
117450666 (colgalt1a)
Enzymes [BR:
pgeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117450666 (colgalt1a)
Glycosyltransferases [BR:
pgeo01003
]
O-Glycan biosynthesis
O-linked Gal type
117450666 (colgalt1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117450666
NCBI-ProteinID:
XP_033944451
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All DBs
Position
8:complement(19540286..19547798)
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AA seq
609 aa
AA seq
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MPGLAWLPAAVLLLLSGCSPARGYFAEERWSPESELLAPRVLVALICRNSEHSLPYFLGN
IERLNYPKDRMALWVATDHNKDNTTVILRDWLVKMQNLYHYVEWRPKEEPRGYRDEDSPK
QWTDLRYEHVMKLRQAALVSAREMWADYFMLADCDNLLTNPDMLWKLMGENKTIIAPMLE
SRAAYSNFWCALTSQGYYKRTPAYLPIRKHVRKGCFAVPMVHSTFLIDLRKEASRQLAFH
PPHPEYSWAFDDIIVFAFSARMADVQMFVCNKETYGNLPVPLRSHNTLQDEADSFLHSLL
EVNVRNPPVMPSKYVPVPTKQPDKLGFDEVFMINLPRRTDRRERMMSTLYEQKIACKVIA
AVDGTGMNISEVHNLGIHMLPGYNDPYHNRPLTKGELGCFLSHYNIWKEIVERRLETSLV
IEDDLRFEIFFKRRLMNLMKEVEDEGLDWDLIYIGRKRMQVDRPEKAVPNIHNLVEADYS
YWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMFNKHPVFDYMKQFETRDLKAFSAEP
LLVYPTHYTGDSGYISDTETSTVWDNDKVRTDWDRGRTGKTGQQAEISTEAQNSDVLQSP
LDSAAREEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctcgcctggctccccgctgccgtgctcctgctgctgtccggctgctctccg
gctcgcggatacttcgctgaggagcgctggagccccgagtctgagctcctcgcgccacgg
gtccttgtcgccctcatctgcaggaactccgagcactctctgccgtatttcctcggtaat
attgagcgccttaactatcccaaggaccgtatggctttgtgggtggcaactgatcataac
aaggacaacaccaccgtcattctgcgggactggcttgtgaagatgcagaacctttaccat
tatgtggagtggaggccaaaagaggaaccccgaggttatcgtgatgaggatagtccgaaa
caatggacagacctccgctatgagcatgttatgaaacttcggcaagcagcgctggtgtcg
gctcgtgagatgtgggcagactacttcatgctggcagactgtgataacctcctcaccaat
cccgacatgctctggaagctcatgggagagaacaagaccatcattgctccaatgctcgaa
tcccgtgcagcctattcaaacttctggtgtgcattgacctcccagggttactataagcgc
actcctgcatacttacccataagaaagcatgtgcgcaagggctgttttgcagttccaatg
gtccactccaccttcctgatagacctcaggaaagaggcgtccaggcagctggcctttcac
ccgccacacccagaatacagttgggcttttgacgacatcattgtgtttgcgttctccgct
cggatggcagatgttcaaatgtttgtgtgtaacaaagagacctatggtaaccttcctgtg
cctctgcgatcccacaatactttgcaagacgaagctgacagcttcttgcactccctgctg
gaggttaatgtgcgaaatcccccagtgatgccttccaaatacgtacctgttcctacaaaa
caacctgacaaactgggcttcgatgaggtgttcatgatcaacctgccgaggcgcactgac
cgccgagaacgtatgatgagtacgttatatgagcagaagatagcatgcaaggtcattgca
gctgttgatggaacagggatgaatatcagtgaagttcataatttaggcatccacatgctc
cctggatacaatgacccctaccataaccgcccactgacgaagggagagctgggttgcttc
ctatcccactacaacatctggaaagagattgtggagcgacgactggaaacctccctggtg
attgaagatgacctgcgctttgagatcttcttcaaacggcgcttgatgaacttgatgaag
gaggtggaggatgaagggctggactgggatctcatttatattggtcggaaaagaatgcag
gtggatcgcccagagaaagcagtgcctaatattcacaacttagtggaagcagattattca
tattggactctaggctatatgatatcattacaaggggcggagaagcttttgaaagcagaa
cccctgaagcggattttgccagtggacgagtttctgcccatcatgttcaataaacacccc
gtgtttgattatatgaaacagtttgaaaccagggacctaaaagcattttctgccgagcct
cttctagtgtatccaacacattacacaggcgacagcggctacatcagcgacaccgagacc
tccacagtgtgggacaatgacaaggtccgtacagactgggacagagggcgtacaggaaag
actgggcagcaggctgagatcagcactgaggcccagaactccgatgtgctccagtcgcct
ttggacagtgcggcacgggaggagctatga
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