Pseudochaenichthys georgianus (South Georgia icefish): 117450674
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Entry
117450674 CDS
T09629
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117450674 (samd1a)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117450674 (samd1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117450674
NCBI-ProteinID:
XP_033944462
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Position
8:complement(20007547..20015414)
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AA seq
417 aa
AA seq
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MSEAEYRKWILDTIDSLRSRKARPDLERICRMVRRRHGSEPDRTCAELEKLIQEQTVLKV
NYKGSISYRNAAKVQRRSRKKDDVTTTARRSAVEEASHSDLSNGDSAFGPVDQDEEDLEA
DTSMAMDTDSNADEEGADESRDGQDGPSPGRPEADTSVRCAPVRATSAPCSPSGTRPGPG
CGPVSGLDSASVQKAGERPSSLPPPSPRALTHNDWAYHSAVCPTERQHPGMQRDKAATKP
AVHSAATSPCALKNNVKKEDGGQAVESGLSSDQLVPDYAAGLQEETRNVSDGRPQALSSP
SDNCTLKNKLDITSFPAEEVSVLNGVKDDEVSVKKENMSQNLMQWTVSDVASYFSAAGFP
EQAVAFRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYERHVKVLQRTHFLEYDDV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccgagtaccgcaagtggatcctggacactatcgactcgctgcggtcgcga
aaagcccggccggacttggagaggatttgccgaatggtccggagacgacacgggtccgag
cccgaccgaacctgtgcagaactggagaaactgattcaggaacaaaccgtgctcaaagtt
aattacaagggctctatttcataccggaacgccgccaaggttcagcgaagaagcagaaaa
aaagacgatgtaaccacgactgcgagaaggagcgcggtggaagaagccagtcattctgac
ctgagcaacggggacagcgctttcggtcccgtggaccaggacgaggaggatttggaggct
gacacttcaatggcaatggacacggacagtaatgcagacgaggagggggctgatgagagc
cgggatgggcaggacggaccctctcctggccgccctgaggcagataccagcgtgcgctgt
gcccctgtgcgtgccacctcggccccctgctccccctctggcactcggcctggccccggc
tgtggacccgtctccggcctggacagtgcctctgtacagaaggctggtgagaggcccagc
tccttgcccccccccagccccagggccctcacacacaatgactgggcctatcattctgct
gtgtgcccaacggagcgccagcacccaggaatgcagagagacaaagcagccacaaagcca
gcagtccactctgcagctaccagcccctgcgctttaaagaacaacgtgaagaaagaagat
ggaggccaggcggtggaaagtggcctttcatccgaccagttggtaccagactatgcagca
gggctgcaggaagaaaccaggaatgtatcggatggaagaccacaggcactgtcttcgccg
tctgacaactgtacattaaagaacaagttagatataacgtccttcccagcagaagaagtc
agtgttctgaatggtgttaaagatgatgaagtctctgtgaagaaggagaacatgagccag
aacttgatgcagtggactgtgtcagatgtggccagctacttctcagctgcaggctttcca
gagcaggctgtggcgtttcgaacacaggaaattgatggaaagtcccttctcctaatgcag
cgcagcgacgttttgaccggcttgtctatccgactcggccctgccctcaaaatctatgag
cgacatgtgaaggtgctgcagaggacccacttcctggaatacgacgacgtctga
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