Pseudochaenichthys georgianus (South Georgia icefish): 117450769
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Entry
117450769 CDS
T09629
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgeo02000
]
117450769
03037 Cilium and associated proteins [BR:
pgeo03037
]
117450769
Transporters [BR:
pgeo02000
]
Other transporters
Pores ion channels [TC:
1
]
117450769
Cilium and associated proteins [BR:
pgeo03037
]
Other cilia and associated proteins
Stereociliary proteins
117450769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117450769
NCBI-ProteinID:
XP_033944610
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All DBs
Position
8:21420380..21429791
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AA seq
823 aa
AA seq
DB search
MAYSVNISQTDSDSESDFEDMGGSKPSQGTFRFIRESAASTQRCPESLQMDDFRGCTGAN
REDLPFTASGHMRDETLDTGQRKSLQRHHWSAATLKVLSSMPSRTAGINAVIPKYARDSS
QQPQTSSHDSSHHSKPIQADFVQEQMEETSAEEKQLVSNLRGLSVSEAMRKLRATPLSLA
DKMRVRRLAFRDVDESSFISRNIPCYRRLGVYISRTWSHCLFICLSVLTSLQLWHSPMKI
LSGRFGTGVLSYFLFLRTLLLFNLFLFTINGLFLVFPQAVNPPPHDPHSNNFTGLELLTG
TGYLSQSVMFYGFYTNTTLTTCRAANSNATNTADLPICDPHQPHMVPYSIPAAYLFTIAI
AFFIICIILVYSMSKSFGRSFQVLKSNRDLAGNIFCIWDFKVSKNTSVRLQSEKISTQLK
ELMSELTSGEDAKSYTLRLCRLMVHVLAWVTCLISIVLSAMAVHYLSEACITRSPFKDTE
LVLPAVVSAINLLLPGLFNLCTWVENYDSPSVCVYVSIFRNLMLKVSIIGVLCFRWLGRI
AVEPVNHGLQCWENCVGQELYRLLLMDFVFTVLYTFLGEFLWRQVGTSPSIHVTSSCCLL
SNFSLNASSRLFFKQVLKRNRKPVFDIARNVLELIYGQTLTWLGVLFAPLLPAVQILKLF
VLFYMKKSSVLLNCQASRQPWRASQMTTLFVFLLFFPSYLGAAVSVIYTIWTIKPSTECG
PFRNLTTMFHSGKLWVQQLESSNTLLFWLSKAYDFLVENPLFLFLVNGFFLIVIYVHSQV
VDGQRRIVSQLQKQIENEGKDKKFLITNLQALYERSSLVSPNR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagtgtgaacattagtcaaacagattctgattctgagtctgactttgaggac
atgggaggaagcaaacccagtcaaggcactttccggtttataagagagtctgctgccagc
acccagaggtgtcctgagtccttacagatggacgattttaggggatgcacaggtgcaaat
agagaagatcttccattcactgcaagcggccacatgagagacgagacacttgacacaggg
cagaggaagtctctgcagaggcatcactggtcagctgctactttaaaggtgctctcctca
atgcccagtcgcactgctgggataaatgcagttattcccaagtatgcgagagactcatct
cagcaacctcagacttcctcccatgattcttctcaccactccaaaccaatccaggctgac
tttgttcaggaacaaatggaggaaacaagtgctgaagaaaagcagttggtgtccaacctc
agaggcctctcagtgagcgaggccatgcgaaagctgcgagccacgccgctcagcttggca
gataagatgagagtcaggcgacttgctttcagggacgtagatgagagttcattcatcagc
aggaatattccatgctacaggcgtctaggcgtgtacatttcaaggacttggagtcactgc
ctgttcatctgcctctccgtcctcacctccctccagctgtggcattcaccgatgaagata
cttagcggacgttttggaaccggggtgctatcctacttcctgtttctccggaccctcctg
ctctttaacctcttcctcttcactatcaacggcctgttcctggtctttccacaagcagtc
aaccctcctcctcatgaccctcattccaacaatttcactggccttgagttgctcacgggc
acgggttacctctctcagagtgtgatgttttacggcttctacaccaacactaccctcaca
acgtgccgggctgctaactccaatgcaactaacacagctgatctgccaatctgtgacccc
caccagccccacatggtgccatacagcatacctgcagcatatttatttaccatcgccatc
gccttcttcattatctgcatcatccttgtgtacagcatgtccaagtccttcgggagaagt
tttcaagtcctcaagtccaacagggatctggcaggaaacattttctgtatctgggatttt
aaagtcagcaagaacacgtctgtcagactgcaatctgagaaaatcagcactcagctcaaa
gagctgatgtctgagctgaccagtggagaggatgcaaagagctacacgctacgactctgc
cgcctcatggtgcacgtgctggcatgggttacatgtcttatcagcattgtcctgagcgcc
atggcagtccactacctatcagaggcttgtatcactcggagtcccttcaaagacacggag
ctggtgctgcctgcagtggtgtcggccattaacctcttactgcccggcctcttcaacctg
tgcacctgggtagaaaattacgactcacccagtgtatgcgtctatgtctccatcttcagg
aacctgatgttgaaagtcagtattattggagtgctatgtttccgctggctggggagaata
gctgtggaaccagtaaaccatggtttacagtgttgggagaactgtgtgggacaagaactg
tatcgtttgctcctcatggactttgtcttcactgtgctatacactttcttgggagagttc
ctgtggaggcaagttggtacttcaccttcaattcacgtgacttcatcctgttgtttgctt
tcaaacttttcactgaatgcatcttctaggctctttttcaagcaagtgctgaaaaggaac
aggaagccagtgtttgacattgcccgtaatgtgctggaactcatatatggacaaaccctt
acctggcttggggtgctgtttgctccactgcttcctgcagtccagatcctaaaactcttt
gtgctattttacatgaagaagagcagtgtattgcttaattgtcaggcatccagacagccc
tggagagccagtcagatgacaacactgtttgtttttcttttgttcttcccctcatatctc
ggagctgctgtgtctgtcatttatacaatttggacgattaaaccctcgacagagtgtggc
cctttcaggaatctcaccacaatgtttcactcgggcaagctgtgggtccagcagctggag
agctccaacacgctcctgttctggctcagcaaggcctacgactttctggtggagaaccca
ctgttcttgttcctcgtcaatggattctttctaatagtgatatacgttcacagtcaagtt
gtcgatggccaaaggaggatcgtcagtcagttacaaaagcaaattgaaaatgagggtaaa
gacaaaaagttcctcatcaccaatttgcaagccctttatgaacggagtagtctggtttcc
cctaaccgataa
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