Pseudochaenichthys georgianus (South Georgia icefish): 117450803
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Entry
117450803 CDS
T09629
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Pathway
pgeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117450803 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgeo03019
]
117450803 (nup85)
03036 Chromosome and associated proteins [BR:
pgeo03036
]
117450803 (nup85)
Messenger RNA biogenesis [BR:
pgeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117450803 (nup85)
Chromosome and associated proteins [BR:
pgeo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117450803 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117450803
NCBI-ProteinID:
XP_033944673
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Position
8:complement(25095703..25108314)
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AA seq
661 aa
AA seq
DB search
MEELDVEPAITNIPAASDGKHLGFAWGPGDILAYETLYKASSGAKGSGCSFIHEVRKDED
IYSPILRKLFNESHHIFVGLQTIKEDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVS
TKDAKVAMQYGNQVSILLAIELIWNLAEVLFIDSAPAGSLLLHLLDWVRLHKADVDEKAT
EVLQSESPAEHKDYWDVVLSYVMQGRLEESRQMLVKQATLHPAPRSMYKLMDTLLSKMPF
YNPGGNQTLTEYDVKWRHWHEEVDRCLQDNSFASNKHLEIICRILVGDEDTLLEHKELLG
TWYHFLVTRLLFSHPTVQPTELHYYAQSCMTMFLDSRSVPEPLDNILLAAFEFDIHQVIK
ECSIALNNWWFVAHLTDLLDHCKLLQSHNVHFGSNLREFLLLEYASGLFTHHSLWQLAVD
YFDHCPDLGRVYLELQIERVPLNTERKALKVLRICEQRQMSEQVRSICKIMAMRALKNNR
LGSALSWSIRAKDAAFATLISERFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFGEAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVSRCAPCAVIFSA
GQTYELMFCLEELTSSLSSVAPATDGTMQDEDIEQTKVELLRLALARNLAMAIVKEGTVS
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttggacgtagagccggccatcaccaatattcctgcagccagtgatgggaag
cacttgggatttgcctggggtccaggtgatatccttgcgtatgagactctttacaaagca
tcatcaggtgccaaaggatcgggctgctccttcatccatgaggtcaggaaagatgaggac
atatattcccccattttacggaaactcttcaatgagtcacatcacatctttgttggcctg
cagacaattaaagaagacctccctagcaagaacaaaaaaccccaatttgtcagcatcagt
aaaaactatagatctgtgatacgagcctgtatggaggagcttcagcaagttgcagtttct
acaaaagatgcaaaagtggccatgcaatacggaaatcaggtgtccattctgttggccata
gagctgatctggaatctggctgaagtgctgttcattgattctgctccagcgggttccctg
ttgctccacctactcgactgggtaaggttacacaaggctgatgtggatgaaaaggccaca
gaagtgctgcagagtgagagccctgctgagcacaaagactactgggatgtggtgctgagt
tacgtgatgcagggcaggttggaagaatccagacagatgttggtgaagcaggccacccta
caccctgcccccaggagcatgtacaagctgatggacactctgctcagcaagatgcccttc
tacaatcctggaggcaaccagacgctgacagagtatgatgtgaagtggaggcactggcat
gaggaggtggaccgctgcctgcaggacaattcattcgccagcaacaaacatctggagatc
atctgcaggatcctagttggggatgaagacacgttgctggagcacaaggagctcctaggc
acctggtatcacttcctggtcacgagactactcttcagccaccctacagtccaacccaca
gagttacactactatgcacagtcctgcatgacgatgtttctggactcgaggagcgtccct
gaacccctggacaacattttactggctgcgtttgagtttgacatccaccaagtcatcaag
gagtgcagcattgctctcaacaactggtggtttgtggcccatttgacagatctgttggat
cattgcaaactcctccagtctcacaatgtgcattttggatccaacttgcgagagtttctc
ctgctagaatatgcttctggtctcttcactcatcacagtctttggcagttggccgtggat
tactttgaccactgcccagatttaggccgggtgtacctggagctgcagattgagcgcgtt
cctttaaacacggagcgcaaagccctcaaggtgctcaggatctgcgagcagaggcaaatg
tcagagcaagtgcggagcatctgtaagatcatggctatgcgagccctgaagaacaacagg
ctgggctcggctctctcctggagcatcagggccaaagatgctgccttcgccaccctcatc
tcagagaggtttctacaggattattgcgccagagggacattctctgacctggatctgatt
gacaacttgggtcccgcaatgctgctcagcgacaggctcactttccttgggaagtaccgt
gagttccaccggctgtacggagagaagcgcttcggcgaggcggccaagctgctcctctcc
ctgatgacggccaagatcgccccccgcagcttctggatgaccctgctgaccgacgccctg
ccgctgctggagcagaaggaggtcagtcgctgtgcaccgtgcgcggtgatcttctcggcc
ggccagacctacgagctgatgttctgtctggaggagctcacctcctccctgagctccgtg
gctcccgccacagacgggactatgcaggatgaagacatagagcagaccaaggtggagctc
ctgagactcgctctggccaggaacctggccatggctatagtcaaagagggaactgtgtca
acatga
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