Pseudochaenichthys georgianus (South Georgia icefish): 117450827
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Entry
117450827 CDS
T09629
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
pgeo
Pseudochaenichthys georgianus (South Georgia icefish)
Brite
KEGG Orthology (KO) [BR:
pgeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgeo03000
]
117450827
Transcription factors [BR:
pgeo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117450827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
117450827
NCBI-ProteinID:
XP_033944704
LinkDB
All DBs
Position
8:complement(24435243..24446034)
Genome browser
AA seq
2227 aa
AA seq
DB search
MQSFRERSGGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPHPGPG
PGPGHTRSGYEAHPLANPTTMPPAVGPGAAGVPKDCYSQQAYPGYPGNGGGNGSGNAIPA
SSQAKKSYRGSKVPPPNPGQHLQGPGGYSNHMGPGSYSAQYMSEGHLQQKWEDSAQLAQY
DPEMVGRMEAGGTPAPVSSQYMDQNMLGHSQTQCHQPSTPAYTSPHHQPHPPNPSPSPLM
YPQSHLHYPQHSPSPSPYMEKCSPMPQCYKGYNIPPNSQYGRQMSSHSNLKPGAYRSTQN
SYGYQQTPSRGYEQQPPLQAMPNPQEPHPKYQHYSQPQQNYCLSELSVRSPEQYYQTCSP
SSSHSPARSVGRSPSYSSTPSPLMINPESFQYGQPPMTPGAASSASSSSAGIQEQTNTNT
MLMPPRSHPSPNVPHAAPHSYTTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNN
VQQLLLSEAMVANKKSGKRSSGGSNSSAGTGASTKKGEEYKSPAYPDGGGGSIGGGAMQD
PYSTPQHQPMPMELQEGGYSSSSDEQLERGYYYCGQGRSPAQAPNNTQLSLDTASSCSMT
SPDDMSTRSGDSGLHNLTPDPNRCQSSQGGDGMSTPVKSIGDERSPTSFTIPSPMKQERD
SPSDIQHINEPVKENFEESAWTEKTSEKEEVSTQNTPDHERDSDTTKSTEHLEKWSDEEK
YPALYSKVNEEETETKYCYKETVYQEAQSKYDPDTRDSVKQSPAALSDTSHKEHFGHEMK
SEAFKSESPTASESSVKTLPFISSGDLEQDQYSTEKEDSSENPSPSPQVEALDESNSDKR
ERRDDEDEEEMEEEGGGQEEANEEQEEEIQKQQASLSPPLSVEAREDLGEGEKVSSTEEY
MNNRDGQDKPPGDFCSRTESESTELQTDNEPSGAPAHPNAAAATADASARESAIGDTAPQ
PQSAMPVFSALNDKTTPSAQTRDHIDHIDTKVLEPDSPQLPGKSILPSAPSWADTPPSPK
KGDEDMEPGISCASAVTPLAKPEPVAPSAQPRAFGRKHARGRRRIVHSGVGIRRQLGLER
EGEEEGASSHTQKLCVPLSKLELFSDQIDITHQESIVSQTPKMLSDGFRSRMCTRSFNAP
EVPPKVEPHVKRKPGPKPGPKPGLKPGLKPSPKPGLKPGLKPGPKPGPKPGPKPGPKPVQ
NEPELPQKIETPVKRKPGPKPGSKPAPKPGPKPSQKAAPKPGPKPGPKSADVLPPEDTSP
IKPSVGRPKGSVSKAKIVQQEEIIPPLPDLPSRVRKSPTVTISQVTQDVKAVNQEESKPN
PEVKAPEKESKNMILRSRKPSQEKLSKEKIKAEDILPQTLTEIKPSDDSPKVEESDILEQ
PPTPIPNAVKNRDVPADPPTPPTPPAQPVPTEPSEEKTSLPLKRKTSPELSTTPVKKKRG
PKPKPKTIPPQPPLLEQVVSTPKEKGVKGTRRKRGPPKKTSSVAPPPKDTPPNISETDIA
SDVPVVPPQGPTRTKVLPPRKGRGQKYEAMVQKITSPSSKKHLPIPQIDTNLTDDVTAKA
LSQHVLKEGEATMLINSTAIIEGEVKSIESRQEGVKQPEGVDRKKEITREEEKHQVIQEA
VTPDEVRQRVTEELFKKAETRQQNSETKTQQDAGADKVWSSIDPQEEVRAPGDSALQALE
SVSSASKSSRTKRKRWAMVESTDATVVALEAGSLIVTTPRLAKQRAIKNNHEMHLKQRRK
KRKGQASLEETETVEETNIETAEQQHEKEEEKVTPTEPTRPLPISTDEITEAPQVTSTEL
IKKPRRGRKPSTNPSKRKRGQSSLEQIPSKPMKAHKKPGPKPGMKDAMEVIEAVVRAAGC
ASIQKEEREKEEMERRETEMDERSEPCIMGPVVTVTEKQTEIVTMKRIRRKPVHQNPNLS
FCPYVRINNSRDFSSWCAIVNKPEDAVIFQRRRKKGILRMRNPFTVAKGVPNTAAMLQGP
LVKMNLIDKCLTCCLCGKPANYRDLGDLCGPYYTEDCVPRKILTVEHTESLREESQKTDD
NNSSSSDEPSNSLKNESEGSTEKEGGTEASAQEGSSSRHHHWRYRRAERAERTGQEAGPR
RLKLRERFRRMQQLQAVSSGASSDQERGGSVFQRLQVEAESKEHWAHENCTIWTKGVVMV
AGRLYGLREAASNSAQASCFKCQIEGASLSCCWRGCSHKYHYVCAKEIGCTFHEDDFSIK
CPKHEDL
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcggtggttaccacagcaaccaaccctgctaccagcag
gagcctcatgaattatcccgtctggagacctaccggcaacacccgcatcatccccaccct
cagcacccgcacccaggccccggtccacacccaggccccggtccacacccaggcccaggc
ccaggcccagggcacaccaggtcaggctatgaggctcatccactggcgaaccccaccacc
atgcctccggctgtgggaccgggagcagcaggagtacccaaggactgttacagccagcaa
gcataccctggttaccctggcaatggtggagggaatgggagtggaaatgcgatcccagca
tcctcgcaggcaaagaaatcctacagaggaagcaaagtgcccccaccaaaccccggacaa
cacctacagggtcccgggggctatagtaaccacatgggcccggggagctactcagcccag
tatatgagtgagggtcacctccagcagaaatgggaggactcagcccagttagcacagtat
gacccagagatggtggggcgtatggaggctggtgggacccccgcacctgtgtcttctcag
tatatggaccagaacatgctgggccactcgcagacccagtgccaccagccctccacccct
gcctatactagcccccaccatcagcctcacccccctaacccttccccctcccctctcatg
tacccccagagtcaccttcattacccacagcactcaccctctccttcgccatacatggaa
aagtgcagccctatgccccagtgttataaaggttacaacataccccccaactcccagtat
ggcagacaaatgagcagccacagcaatctgaagccaggggcttaccggtcgacccagaac
agttacggctaccagcagactccctccagaggttatgagcagcagccccctttacaggcc
atgcctaacccccaggagccccaccctaaataccaacactacagccaaccacaacagaac
tactgtctctctgagctgtctgtcagatcaccagaacagtattatcagacctgcagcccc
tcctcaagccactcccctgcacggtctgtaggacgctccccctcgtacagctccacccct
tcaccactaatgatcaatccagagtcgttccagtatggccaacctcccatgacccctggg
gcagcttcatccgcttcatcctcttcagctggtatacaggagcaaaccaataccaacacc
atgttgatgcccccacgctcacacccctcacccaatgtgccccatgcagccccccacagc
tacactacgacgccacaggtccccaccatgaaagaacgcttctcagagaagctgttgtca
aaccccagcttgtggagtctgaatgccctcacctctcaggtagagaacatctctaataat
gtccagcagctgctgctttcagaggctatggtggccaacaagaaaagcggtaagcgcagc
agtggaggaagcaacagcagtgctggaactggagcatccaccaaaaagggtgaggagtac
aaaagtcctgcttatccagatgggggtggtggtagtattggcggaggcgccatgcaggac
ccttattctacaccacagcaccagccaatgcccatggagctccaggagggaggatactcc
agcagtagtgatgaacagctggagaggggatactactactgtggccagggcagaagtcca
gcacaggcccccaataacacacaactcagcctggacacagcctcttcctgctcgatgaca
tctccagatgatatgtccaccaggtctggggactcaggtctgcacaaccttacccctgat
cctaatagatgtcagtcatcgcagggaggagatggcatgagtactccagtgaagagcatt
ggtgatgagaggtcgccgacaagctttacaatccctagtcctatgaaacaagaaagggac
tccccttcagatatacagcatattaacgagcctgtcaaagagaactttgaagaatcagcc
tggacggagaaaacgtccgagaaagaggaggtgtccacacaaaacactcctgaccatgaa
agagattcagacacaactaaatcaacagagcatctggagaaatggtcagatgaagaaaag
tacccagctctctacagcaaagtaaacgaagaagagacagaaacaaaatattgctataag
gagactgtgtaccaagaggctcagagcaaatatgaccctgatacaagagactcagttaaa
caatccccagcagctctctctgacaccagccacaaggaacactttggccatgagatgaaa
tccgaggcgttcaagtctgagtcaccaactgcgtctgagagctcagtgaaaacgctgcct
ttcatttctagcggtgaccttgaacaggatcaatattccacagagaaggaggacagctca
gaaaacccctctcccagcccccaagttgaagccttggatgagagcaactcagacaaaaga
gaaaggagagatgatgaggatgaggaagagatggaagaggaggggggtggacaagaggag
gccaatgaagagcaggaagaagaaatacagaaacaacaagcttctctttcccctcctctg
tctgtagaggcaagggaggatctcggagagggggagaaagtgtcatccactgaggaatac
atgaataacagagatgggcaagacaagcctcctggagatttctgcagcaggacagagagt
gagagtactgagctccagactgacaacgagccttcaggggcgcctgcccatccaaatgca
gcagcagcaacagcagatgcttctgcgagagagtcagccattggggacactgctccccag
cctcagtctgctatgccagttttttcggctctcaatgacaagacaacaccttcagctcag
accagagatcatattgatcacattgacactaaagtattggagccagattctcctcagctg
ccaggaaagtcaatacttccctcagccccctcctgggcagacactccaccctcccccaaa
aaaggtgatgaggacatggagccaggcatcagctgcgccagtgctgtgacccctttggcc
aagccagaacctgtggccccatctgctcagccgagggcatttggacgtaagcatgccagg
ggcaggagaagaatcgtgcattcaggtgtgggaatcaggcgacagctaggcttggaaagg
gagggggaagaggaaggagcctcttcacatacacagaagctctgcgtgcctctaagcaaa
ttagagctgttttcagatcaaattgacataactcatcaagaatctattgtgagccaaact
cccaaaatgttatctgatggttttcgttcaagaatgtgtactcgctcattcaatgcacca
gaggtgccacccaaggttgagcctcatgtaaagagaaaaccaggcccaaaaccaggacca
aagccgggactcaaacctgggctaaaaccaagtccaaaaccagggcttaaacctggtcta
aagcctggaccaaagcccgggccaaaacctggacctaaaccaggaccaaaacctgtgcaa
aatgaacctgagctgccacagaaaattgagactcctgtgaaaagaaaaccaggacctaaa
ccaggttcaaaacctgcgccaaaacctggaccaaaacccagtcaaaaagcagctccaaaa
ccaggaccgaagcctggacccaagtctgcagatgttttgccccctgaagacacgtcaccc
atcaagccctcagttggtcgccccaaaggctcagtttcgaaagcaaagatcgtacaacaa
gaagaaatcattccacctttgccagacttgcctagcagggtcaggaagagcccaacagtt
acaatatcacaagtaactcaggatgtaaaagcagtaaaccaggaagaaagtaaaccaaac
ccggaggttaaggcaccagaaaaggagagtaagaacatgatattgagatccagaaagccc
tcgcaagaaaaactgtcaaaagaaaaaatcaaagcggaagatattctgccccagacattg
acagaaattaaacctagtgatgattcaccaaaagtagaggagtctgatattttggaacaa
cctccaactcctattcctaatgcagtcaaaaacagagatgttccagcggacccacccaca
ccacccacaccacctgcccaaccagtcccaactgaaccatctgaagaaaagacatcactt
ccattgaaacggaaaacaagcccagaactttctacaacaccagtaaagaaaaagagaggt
ccgaagcccaaaccaaaaaccataccaccccaaccccctctgctggaacaggttgtctcc
acacctaaagagaaaggtgtcaaaggtaccagaagaaagcgagggccacccaagaaaaca
tcttcagtcgctccaccacccaaagacactcctccaaacatcagtgaaactgatatcgct
agtgatgtgcctgtggtgcctcctcaaggccccactagaacaaaagttctcccaccacgc
aaaggcagaggacagaagtacgaggccatggtgcagaaaataacatctcctagttcgaag
aaacacctcccaattcctcagatagacactaatctaaccgatgatgtgacagctaaggct
ttgtctcaacatgtcttaaaggaaggtgaggcaactatgctcataaatagcactgcaatt
atagagggagaagtcaaaagtatagagtctagacaagagggagtgaaacaacctgaagga
gtggatagaaaaaaggagattacacgagaagaagaaaagcatcaggttattcaagaggca
gtaacaccagatgaagtgagacaacgggtgacagaagagctattcaaaaaggcagagaca
agacaacaaaattctgaaacaaagacacagcaggatgctggagctgacaaggtttggagc
tcaatagacccccaagaagaagtcagggctccaggagattctgcactacaggccttagaa
agtgtatcttctgcttccaagtcctcgagaactaaaaggaagcgatgggcaatggtggag
agcacagatgccacagtagtagccttggaagcagggagcctaatagttacaacaccaagg
ctggccaagcagagggccattaaaaacaaccatgagatgcatctaaaacagaggagaaag
aagagaaaaggccaagcttctctggaagaaacagagacagttgaggagacaaatattgaa
acagcagaacaacaacatgagaaggaagaagagaaggtaacacccacagagcccacaaga
cctctgccaatcagcacagatgagattacagaagccccccaggttacaagcacagagctc
attaagaaacctaggagaggcagaaaaccttccacaaatccaagtaagagaaaacgagga
caatcctcattagagcagattccaagcaagccaatgaaagcccacaaaaagcctgggcca
aaacctgggatgaaagacgccatggaggttattgaggcagtagtaagggctgcagggtgt
gcaagtatccaaaaagaggagagagaaaaagaagaaatggaaaggagagaaacagaaatg
gatgaaagatctgagccatgtatcatgggtcctgtggtaacagtaacagaaaaacaaact
gagattgttactatgaaaagaatcaggcgcaaaccagtccatcaaaatcccaatttgtct
ttctgtccttatgtaaggattaacaactccagagacttctcttcttggtgtgccatagtc
aacaagcctgaagatgcagtaatctttcagagacgtagaaaaaaaggcattctcaggatg
agaaatcctttcacagttgcaaaaggtgtgccgaacactgctgccatgctacagggaccc
ttggtgaaaatgaatctaattgacaagtgtcttacatgttgcctctgcggaaagccagca
aattacagagacttaggtgatttgtgcggcccctactacacagaggattgcgtaccacgg
aagattttgaccgtggagcacacagagtccctcagggaagagtcacagaaaaccgacgac
aataacagtagcagcagtgacgaaccgagcaactctttaaagaatgagagcgagggcagc
acagaaaaggagggcggtacagaggcgtcagctcaagagggcagtagtagcaggcaccat
cattggcgctatcggcgggcagaaagagccgagagaacgggtcaagaggctggtccacga
agattaaagctccgagagaggttcaggaggatgcagcagcttcaggctgtcagctcaggg
gcctcgagtgaccaagagagggggggcagtgtgtttcaacggctacaagtagaagcagag
agtaaagagcactgggcccatgaaaactgcaccatctggaccaagggggtagtaatggta
gctgggaggctctacggactgagggaggctgccagcaactcagcccaagcgagctgcttc
aagtgccagattgagggggcgtccctcagctgctgttggagaggatgctctcataaatac
cactatgtctgcgccaaagagataggctgcacattccatgaggatgacttctccatcaaa
tgtcctaaacacgaggacctgtaa
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integrated database retrieval system
